YALI0F25905g

Overview

Description highly similar to uniprot|P61830 Saccharomyces cerevisiae YBR010w HHT1, histone H3
Locus type CDS
Locus tag YALI0F25905g

Location

Species Yarrowia lipolytica Positions 3335364..3335880
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 517 (nuc.)
Previous locus YALI0F25883g Next locus YALI0F25947r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25905g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25905gYALI0F25905g_mRNA-001YALI0F25905g_CDS-001

Nucleotide sequence

 

>YALI0F25905g
ATGGCCCGAACAAAGTCTACAGTTATTGCCCGAAAGGTCACCGGTGGAAAGGCTCCCCGA
AAGCAGATTGGATCCAAGGCTGCCCGAAAGTCCGCTGCTCCTTCCAACACCTCCGGTGGT
GTTAAGAAGCCTCACCGATACAAGCCCGGTACCGTCGCTCTCCGAGAGATTCGACGATAC
CAGAAGTCCACTGAGCTCCTCATCCGAAAGCTCCCCTTCCAGCGACTTGTCCGAGAGATT
GCCCAGGACTTCAAGACCGATCTCCGATTCCAGTCTTCCGCCATCGGTGCTCTCCAGGAG
TCCGTTGAGGCCTACCTTGTCTCCCTCTTTGAGGACACTAACCTGTGTGCTATCCACGCC
AAGCGAGTCACCATCCAGAAGAAGGATATCCACCTTGCTCGACGACTCCGAGGCGAGTAA
ATGGTTTAGCTTGCTTACTTGGGTTTTATTTAATGAGGGTATTTAAAGTGTAATATTATA
AATTACTAAGAAAAAACATCAACTGTACTTCGCTTAA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F25905g_CDS-001

Protein length: 140 aa.
Product: Histone H3, putative

>YALI0F25905g_CDS-001 MARTKSTVIARKVTGGKAPRKQIGSKAARKSAAPSNTSGGVKKPHRYKPGTVALREIRRY
QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHA
KRVTIQKKDIHLARRLRGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG