YALI0F25773g

Overview

Description similar to uniprot|G8JXW9 Eremothecium cymbalariae hypothetical protein Ecym_8424
Locus type CDS
Locus tag YALI0F25773g

Location

Species Yarrowia lipolytica Positions 3313758..3315137
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1380 (nuc.)
Previous locus YALI0F25751g Next locus YALI0F25784t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25773g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25773gYALI0F25773g_mRNA-001YALI0F25773g_CDS-001

Nucleotide sequence

 

>YALI0F25773g
ATGAAGCTCACCGTTCTGGCTCTCGCCTCCACTGTCGCCGCTGCTGGCTTCACTCCCGGT
CTCGGAGAGACCCAGACTCAGGCTTTCACTGGAAACACCAAGACTCTGTACACCAACACT
CCCGTGATCCCCTCCCAGACCCCTGATCTGGCTGAGATCAAGGCTGCCGCTGCCACTGCC
ACTTCCAACTCTTTCAAGTCCAAGAAGACAGTTAAGGGTAAGGCTTTCGACAGATACCAT
CAGATCTGGCTGGAGAACACTGACTACCAGAAGGCCTTTGACCAGGCCGGCCTCAAGGCT
CTGACCAAGCAGGGTATCCTTCTCACTAACTATTTTGCTCTGACCCACCCCTCCGAGCCA
AACTATGTTGCTGCTGTCGGTGGAGACTACTTTGGTATCTTCGATGACATTTACCGAACT
CTTCCCGAGGAGATCTTCACAGTTGCCGACCTGCTCGACTCCAAGTCCATCTCGTGGGGT
GAGTACCAGGAGCATCAGCCCTACACCGGCTTCCAGGGCTTCAACTACTCTCGACAGACC
GACTACGCCAACGACTACGTCCGAAAGCACAACCCCCTGGTCATGTACGACTCGGTTACT
AAGAAGCCGGAGCGACTTGGTAACCTCAAGAACTTCACCGAGTTCCACAAAGATGTGGCT
GACAAGGACCTCCCCCAGTGGGCCTTCATCACCCCCAACATGACAAACGACGGTCACGAT
ACCGACATTGAGGTCTCTGGAACCTGGTCTTACAACTTCCTGTCCCCCCTCCTCAACAAC
ACTGACTTCATGAAAGACAACCTCATCATCCTGACCTTTGATGAGACAGAGACATACACC
GAGCAGAACCGAGTTTTTGCTCTTCTGCTTGGAGGTGCCATCCCCGAGAACCTCAAGGGT
ACCACTGATGACACCGTCTATAACCATTACTCTAACATTGCTACTGTTCAAGCTAACTGG
GGGCTTCCCCATCTTGGACGAGGAGACGTCACTGCTAACGTCTTCAAATTCGTTGCCGAC
AAGATTGGTTCTTCTGTCACCAACCACAACATCACCGAGCACGGTCTGTACAACAACTTT
TCCTACCCCGGCTACTTCTCCGACAAGTCTCTTGGCTTCCCTACTCCTCTCATTAACGCT
ACTGGTACTTCCGGCAACAAGATTCTGCCAGCCATTGCTGATCTGGTCAAGTCTGGCAAC
TCCTCTGTCGCCAGCAACTCAACTGCAGGCCACAATGGCACTGCTACTGGCGCTAAGGCC
TCCGGATCTGCCGGTGTAGCTGCTGCCAAGGGCTCTGTTTCCCACAACAAGAACGGTGCT
GAAGCTGCCGTTGTTTCCCTTGGTGCCGCCCTGGTTGGTGTTGCCGCCCTTCTTCTTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25773g_CDS-001

Protein length: 460 aa.
Product: Conserved hypothetical protein

>YALI0F25773g_CDS-001 MKLTVLALASTVAAAGFTPGLGETQTQAFTGNTKTLYTNTPVIPSQTPDLAEIKAAAATA
TSNSFKSKKTVKGKAFDRYHQIWLENTDYQKAFDQAGLKALTKQGILLTNYFALTHPSEP
NYVAAVGGDYFGIFDDIYRTLPEEIFTVADLLDSKSISWGEYQEHQPYTGFQGFNYSRQT
DYANDYVRKHNPLVMYDSVTKKPERLGNLKNFTEFHKDVADKDLPQWAFITPNMTNDGHD
TDIEVSGTWSYNFLSPLLNNTDFMKDNLIILTFDETETYTEQNRVFALLLGGAIPENLKG
TTDDTVYNHYSNIATVQANWGLPHLGRGDVTANVFKFVADKIGSSVTNHNITEHGLYNNF
SYPGYFSDKSLGFPTPLINATGTSGNKILPAIADLVKSGNSSVASNSTAGHNGTATGAKA
SGSAGVAAAKGSVSHNKNGAEAAVVSLGAALVGVAALLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG