YALI0F25729g

Overview

Description weakly similar to uniprot|Q04740 Saccharomyces cerevisiae YMR234w RNH1 ribonuclease H
Locus type CDS
Locus tag YALI0F25729g

Location

Species Yarrowia lipolytica Positions 3310300..3311147
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 848 (nuc.)
Previous locus YALI0F25707g Next locus YALI0F25751g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25729g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25729gYALI0F25729g_mRNA-001YALI0F25729g_CDS-001

Nucleotide sequence

 

>YALI0F25729g
ATGCAGCCAGTAACTACTGCTGAAGACCCCAATTATGGCATCACAGAACAACCGCCATCC
ACGCCACACTATGTTGTGCGCATGGGCCACAAGCCCGGAGTGTACACGGACAGAAACATG
GCTGTCCTCATGCTCACCAACTATCCCGATTCCAACGCCAAAGAGTTCATGTATGAGCAG
GAGGCCGACGCATACATGAAGACGCCTCTTGGAGGAGGTTTGCACACTGTGGACGGGTAC
GGAAACCCGATCCGGGTGCTCTACACGTCTGGTGTGTGTGACAACAACGGCTACGTCAAC
TCCAAGGGTGGCATTGGCATTGTTTTTGGAGCCCCCAACATCTGCAACTTTTCGGGTCCG
TTGCATGGCTCCAAGCACACGACCCAGAGGGCTGAGCTGGCAGCAGTTTACCAGGCGTTG
CGAATCGTCTGGAATCGACGAGACTACCCCAAGTGGGAGATCAGAACAGACTCGGTCTAT
GTGTTGGAGTGTCTGACGGTGTATTTGGAGGAATGGAAAAAGAACGGCTGGAAAACGACC
CAGGGTTATCCTGTGGAGAACCAAGAGTACATTCTGGCGATCGACAAGTTGCTCAAAAAG
CTGGCGTACAAGGGCGTGTTCTTCCAATTTCAACTGGTTGGCACCAACACAGGCGACAGA
TGGGTCAGTTCGGCTTATCAGCTAGCACGACGAGGCATTGAGGAGCCGGAGTTCATCATG
CCTGAGAGTGAAAAGGAGAGTCGAAGTCGGCGCAGCAGTGCCTAAGGAGGTGAGTGGGAT
CTAGCAACAGACGAGGGAATGCGCTTTATTTATTTGTCTAGTAATTGAGGAGATGCACTG
TATACAGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F25729g_CDS-001

Protein length: 255 aa.
Product: Conserved hypothetical protein

>YALI0F25729g_CDS-001 MQPVTTAEDPNYGITEQPPSTPHYVVRMGHKPGVYTDRNMAVLMLTNYPDSNAKEFMYEQ
EADAYMKTPLGGGLHTVDGYGNPIRVLYTSGVCDNNGYVNSKGGIGIVFGAPNICNFSGP
LHGSKHTTQRAELAAVYQALRIVWNRRDYPKWEIRTDSVYVLECLTVYLEEWKKNGWKTT
QGYPVENQEYILAIDKLLKKLAYKGVFFQFQLVGTNTGDRWVSSAYQLARRGIEEPEFIM
PESEKESRSRRSSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG