YALI0F25707g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F25707g

Location

Species Yarrowia lipolytica Positions 3306982..3308766
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1785 (nuc.)
Previous locus YALI0F25685g Next locus YALI0F25729g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25707g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25707gYALI0F25707g_mRNA-001YALI0F25707g_CDS-001

Nucleotide sequence

 

>YALI0F25707g
ATGCTGTCTCGAACTCCCCGACCAGACACCAAGCACAAGCGAAAGTCGTCACTACTGGAT
CTCTTCGGTCTCGGACAACTCGCAAAGGAAGACCCCCAGGTGCCTGAAATCTCAGCACCC
ATCCCCAGCTCGCTACAGCAGTTCCATACGACCCCCCAGGATCTGCAAGGCGAGTTCATC
GATCTCACTCTGGGCGCCAAACGAGACTCGTCACACTTTCACGCTGAATGTGAAACGCCG
CCCAAACGGCGCTCCTACTACGACCCCAACACAGACCAGCTTTCGCCCATTCAAAACGTG
GACGCCAACGACCTCGTCAACGAAACCATCTCGCTGCGAAACAGAGACTCCAGCAGGGAC
TACACTCACCTGTCCCACTCCGCGCAACCGTCACTGTCGGAATCTCTCCACGACTCCGAG
TCACACTGCATGTCAGAGTCGCAACCGCAGACACCCCATACAGACTACAACGACGAATTT
GAAGACGACGACGCTGCCATCCTACAAGCCGAGTGCGTCGAATTCCATCAACCGCGATTC
CAGACAATGAACCCGGCGTCCATGCACTCTGTCTCCACCATTGGAGATGCCTGTGTGCGA
GTTGGATGCTCTTCTCCCGCCTTCTCGGACGCTGATCCATTCAAGAAGCGAGAGTCGATG
CTCTCCACCTCCACTCTGGACAGAACCCCCTCGAAAAGAGGCAACAAAAATGATCTCATC
GACAGATACCTCAACTCCCTCTACGATAGTCAAGATCACCCTTCCATCGACGATGACATG
AACATGGACGTTGACGAAGATACTACTCGAGTCTACTATCAGCATCCCGTGACTCCTCCC
CAGTCCACGTTCAACTTCCCCACAAGAGATTCCTCTCTGCCCCAAAATTCACCTCGAAAC
GAGTTACAATCTGCATCTTCCTGTTATTCTTCTAATGTGTCTAGCGCCCAAAAGTCCGTT
CAGGTGGAAGACGCCTCGTTCGCTATGATCAACCCTTACGCCAACGGTTCCCGGTCATCT
TCTGCATCTGTCAATGTGGTACCTCGATCCCGAGTGGCCTCTTCAGGCGGAGTTAACAGA
AAGCCTGTTCCTGCCAGACAGGAGGAGTCCGTCATGGGAGAATTTGAGAACGAGCTGGCC
CGTCTGGACTCCATTGGTACCTTCACTGAGCTGCCTCCTCCTGTCTCATACGCCAGTTCT
ATCATCAGCGATAAGTTGACCCCCCACCCTGCTCTTGTCAATGCTCGCAACACTGCTCCT
GGAATGGGTTCTCGAAACGGCTCACAGCGAGACATTTCCCGAGATATGGCTGGCATGTCC
ATTGCCTCCTCCTCGACACAGTCGGTCAACCATGCTGCTCGAAACCCCCATATTCAGCAG
CACTCCACTACACCTTCTGTTTCTTCTGACAACAGATCCAAAAGACATTCTCTCAGTGGC
AAGTTTGGTAAGCTTAAGGACTTTGGGCGACGAATTACACACTCCAAGCCTACTGCTCCT
GCTCCTACTCCCGCTGTCTCTTCTGCTGCCCCTACCCCTCGACCTGGTTCTAACAGATCT
GACAACAGCCGACGACGATCCATGCTGGGCTTGTTTGGCTCTTCTGGCGAAGACAACAAG
AACTCTTCTGCTTCGCACCGACGAACCTCTACTCTTGCTAGCAGCCACATCAACGTTGCC
CCTGTTATTAACATGCGGTTCGAGTCTGAAAAGCCCGACATTGGACGAGGATTCTAGTGT
TACCTTTTGTTTCACTCTATAATTTATTGCATTTCTACCACCCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25707g_CDS-001

Protein length: 579 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F25707g_CDS-001 MLSRTPRPDTKHKRKSSLLDLFGLGQLAKEDPQVPEISAPIPSSLQQFHTTPQDLQGEFI
DLTLGAKRDSSHFHAECETPPKRRSYYDPNTDQLSPIQNVDANDLVNETISLRNRDSSRD
YTHLSHSAQPSLSESLHDSESHCMSESQPQTPHTDYNDEFEDDDAAILQAECVEFHQPRF
QTMNPASMHSVSTIGDACVRVGCSSPAFSDADPFKKRESMLSTSTLDRTPSKRGNKNDLI
DRYLNSLYDSQDHPSIDDDMNMDVDEDTTRVYYQHPVTPPQSTFNFPTRDSSLPQNSPRN
ELQSASSCYSSNVSSAQKSVQVEDASFAMINPYANGSRSSSASVNVVPRSRVASSGGVNR
KPVPARQEESVMGEFENELARLDSIGTFTELPPPVSYASSIISDKLTPHPALVNARNTAP
GMGSRNGSQRDISRDMAGMSIASSSTQSVNHAARNPHIQQHSTTPSVSSDNRSKRHSLSG
KFGKLKDFGRRITHSKPTAPAPTPAVSSAAPTPRPGSNRSDNSRRRSMLGLFGSSGEDNK
NSSASHRRTSTLASSHINVAPVINMRFESEKPDIGRGF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG