YALI0F25553g

Overview

Description similar to uniprot|Q9P702 Neurospora crassa Probable sugar transporter
Locus type CDS
Locus tag YALI0F25553g

Location

Species Yarrowia lipolytica Positions 3283216..3285015
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1800 (nuc.)
Previous locus YALI0F25531g Next locus YALI0F25575g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25553g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25553gYALI0F25553g_mRNA-001YALI0F25553g_CDS-001

Nucleotide sequence

 

>YALI0F25553g
ATGATACTTTTTTGGTTACACAGAGGCGTCTTCGCACTATCTGAGTATCGTATATATATA
CGGGGACAGGTCCCCAGAAGCCGGTCACTATTTCTCACAGCCCGACTCACAATGTTATTT
TCCAAAGCGTCAGGTACAAAGTACTTTGGACTGAAAGGCAAGACTCTTCAGCGAGCCATC
GGAGGCATCGCCGGTCTTGGTTTCTTCCTATTCGGATACGATCAAGGTGTTATGGGCGGT
CTGCTCAACTTGAAGACTTTCCGAGAGCAGTTCGAGACCATTAACACTGTCGATGACACT
TCTCTTCATACTGCTACCATTCAAGGTACCGCTATTGCCGTTTACGAGCTGGGATGTATG
GTTGGAGCTCTTTCCACCATTTACCTCGGAGACAAGCTGGGACGACGAAAAGTCATTTAT
TTTGGAACTTGGATTATCATCATTGGTGCTATTATTCAGACTGCTTCTTACCATCTTGGT
CAACTTATTGTTGGCCGAGTTGTCGCAGGTATTGGTAACGGTCTCATTACAGCCACTGTA
CCCATGTGGCAATCTGAGTGTGCACGTCCCGAAGATCGTGGTCTCATGGTCATGATTGAA
GGATGTCTGATTTCCGGAGGTATTGCTCTTTCTTATTGGCTTGATTTCGCCTTCTTCTTT
GTCAAGGTCGGTTCTATGGACTGGCGTTTCCCTGTTGCTTTCCAGATTCTTATTGCTCTG
ATTATCGTCGCCTTTGTGCTCGAGTTCCCTGAGTCTCCTCGATGGCTGGTCAAGGTCGGT
CGAGAGGAGGACGCACGAGAGGTTTGGGCTGCTCTGGAGAACTGTGGTCCCAACGACGAT
TATATCAACTACGAGATCCACGAGGTCAAGAAGAATCTGGCTGCAGAGGAGCAAATGACT
TCCTGGCAGACTTTCAAGCTCATTTTCACCTATGGAGAGCGAAAGCATTTCCACCGAGCT
TGTCTCGCTTTCTGGAACCAGGCCATGCAACAGCTGACCGGTATCAACCTGATTACTTAC
TACGCCGCCAAGATTTACCAGGACTCTCTCCATATGGACGATGTTGTCTCTCGAGCTCTT
GCTGCAGCTAACGGTACCGAGTACTTCATGGCTTCATTCATTCCCTTCTGGTCTATTGAA
AGATTCGGACGAAGAAAGCTCATGCTTTTCGGTGCTGTTGGACAGGCTTGCACCATGGGT
ATTCTTACAGGTACCGCATGGGCCGCTGACCCCAACAACAAGGACAATCGAGCCGCTGGT
ATTGCTGCTTGTGTCTTCCTCTTCGTTTTCAACTCCTTCTTCGCCATTGGATGGCTGGGT
ATGACCTGGCTGTATCCCGCCGAGATTACTTCACTGGAGGTTCGAGCCCCCGTGTCCGGT
ATCTCTACCGCCTCCAACTGGCTGTTCAACTTCACAGTCGTCATGATTTGTCCTGTCGGC
TTCAACTCCATCCAGTCGTACACCTATACCATTTTCGCAGCCATCAACGCCTGCATGGTC
CCAGTCATTTACTTCCTGTACCCTGAGACTGCTGGCCGGTCGCTCGAGGAGATCGACGAG
ATTTTCAAGGAGTCTAACCCCAAGACCCCCTGGGACGTGGTTGGCATTGCTGCTCGAATG
CCCAAGCGAGACCATTACAACTACGACATCGAGTCTCGAGGCAACTCCATGGGCGAACAA
TACCCCGAGGGCGAGCCCAAGCCCGAACATGAGGAGGTCCCTGAGGGATATACATCTGAG
ACTGCCGGAGAGAACTCCAACAGCTCCGTTGAGTACCCCGACACCACCACTCATCAATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25553g_CDS-001

Protein length: 600 aa.
Product: Sugar transporter, putative

>YALI0F25553g_CDS-001 MILFWLHRGVFALSEYRIYIRGQVPRSRSLFLTARLTMLFSKASGTKYFGLKGKTLQRAI
GGIAGLGFFLFGYDQGVMGGLLNLKTFREQFETINTVDDTSLHTATIQGTAIAVYELGCM
VGALSTIYLGDKLGRRKVIYFGTWIIIIGAIIQTASYHLGQLIVGRVVAGIGNGLITATV
PMWQSECARPEDRGLMVMIEGCLISGGIALSYWLDFAFFFVKVGSMDWRFPVAFQILIAL
IIVAFVLEFPESPRWLVKVGREEDAREVWAALENCGPNDDYINYEIHEVKKNLAAEEQMT
SWQTFKLIFTYGERKHFHRACLAFWNQAMQQLTGINLITYYAAKIYQDSLHMDDVVSRAL
AAANGTEYFMASFIPFWSIERFGRRKLMLFGAVGQACTMGILTGTAWAADPNNKDNRAAG
IAACVFLFVFNSFFAIGWLGMTWLYPAEITSLEVRAPVSGISTASNWLFNFTVVMICPVG
FNSIQSYTYTIFAAINACMVPVIYFLYPETAGRSLEEIDEIFKESNPKTPWDVVGIAARM
PKRDHYNYDIESRGNSMGEQYPEGEPKPEHEEVPEGYTSETAGENSNSSVEYPDTTTHQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG