YALI0F25531g

Overview

Description similar to uniprot|P04456 Saccharomyces cerevisiae YOL127W RPL25 Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit
Locus type CDS
Locus tag YALI0F25531g

Location

Species Yarrowia lipolytica Positions 3279487..3280051
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 565 (nuc.)
Previous locus YALI0F25509g Next locus YALI0F25553g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25531g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25531gYALI0F25531g_mRNA-001YALI0F25531g_CDS-001

Nucleotide sequence

 

>YALI0F25531g
ATGGCCGCCACTCAAGCTCAGAACGCCAAGAAGGCTGCCCTCAAGGGTACCAACGGCTCC
AAGACCCTCAAGTACCGATCCTCCACCATCTTCCGACGACCCAAGGTCCTTGAGCTCCCC
AAGAAGCCCCTGTACCAGCGAAAGGCCGTTGCTCACTACCCCCGAATGGACTCTTACGAT
GTCATCATCTCTCCCCTTAACACTGAGACTGCCATGAAGAAGATCGAGGACTCCAACACC
CTTGTCTTCATTGTCAACAAGAAGGCCAACAAGTACCAGATCCGAGATGCTATCAAGAAG
CTCTACGAGGTCGAGATTGCCTCTGTCAACACCCTCATCCGACCCGACGGTAAGAAGAAG
GCTTTCGTCCGACTCACCGCCGACCACGATGCTCTTGACATTGCCAACAAGATCGGTTAC
ATCTAAACAACTCTTTTATTAGGGAAGTTACAAAAGGCATTTAGCCATCTCAAAAGGTGT
CATTTAGAAAATGCACTAATGAACACATTTGCGAGCAATCGATATTATTTATTGAACGCG
AGCCGACGAAGAGGTAGCTCCTCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25531g_CDS-001

Protein length: 142 aa.
Product: Ribosomal 60S subunit protein L23A, putative

>YALI0F25531g_CDS-001 MAATQAQNAKKAALKGTNGSKTLKYRSSTIFRRPKVLELPKKPLYQRKAVAHYPRMDSYD
VIISPLNTETAMKKIEDSNTLVFIVNKKANKYQIRDAIKKLYEVEIASVNTLIRPDGKKK
AFVRLTADHDALDIANKIGYI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG