YALI0F25509g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F25509g

Location

Species Yarrowia lipolytica Positions 3277301..3278676
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1376 (nuc.)
Previous locus YALI0F25487g Next locus YALI0F25531g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25509g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25509gYALI0F25509g_mRNA-001YALI0F25509g_CDS-001

Nucleotide sequence

 

>YALI0F25509g
ATGTACAAATACATGACTCGCGCGGGGTCCAAAGTGGCCTGCCGATTCACCCGCAACATG
AGCACCCAAGCACACAAAAGCTCGCCCGGCAAGTTTCGAAAACTCGTTAGACTCACGGCG
GGCGGATGTCTCGTGGGATACACCGCTGCCGTCTTTTTCGCCTCTCGAGACGAGCGGTTC
AGAGACATTTTTATCGAAAAGTTCCCGTTTGGCCGGCCCATTGGCGAGTACTTCGAGGAG
CAAGAAATCAAGAAAAACAGAGACTCGCCCAAGCCCAAGCCTATTCCTACTTCTCCTTCT
GGCCAGCCCAATGCTCGAACCAGCCATCTGTCGGCCCTGTACCCCGACAAATCCAACCCT
AACGCCATGACCAACAACCCCGATGGGGACTCGCACCAAGAGCGAAAGTTCAACCTCGAG
AGAGCTCTTTCTTCCAAGGGCACCAAGAAGGAATACTTTGACCCTCTGACTGAGAACCAG
GGCAACTTCTTCGACCCCTCAAGTGGAGTGGTTGCCGAGGAACACAAGGAGTACCTGCCC
CTGATTCTGCTGCACGACTCGGCCGACCATGCTGCCCGACACTCGGCTATGGCTCTCAAC
GACCTCATCTCCTCCATCAACACCTCCATTGTCACCAACGACTCGGTTAAGAACGTCTCC
GACTCGCTCATCCAGCTGTCCGAGTTTGTTGCCGTCAACCACCCCGAGATCCAGACCCAG
CTGTCTGAGCGTCTGGGCGAAAAGGCCCGCCGATTCCATGCGCTGGGCGAGCATTACCAC
ACCATTATCCAGGACTTTCTGCAAAACGAGGTCGAGCACGGGCCTCACCAGGGCCACGCC
GCAGAGGTCGAATTGACCATCTACGAGACCGACAAAATGAGAGACCTGCGAAAGAACGTG
ATCCAGGAAATCCATGATACAGAAGACCTGCTGGTGAAGTACTGCAACCGGTACTCGCGA
CCCGAGGGACCCGTAGCAGAGGTCATCACTCGACGGGTGCCCACAGTTGAGACTGTGACT
CTGGAGCCCATTGACTCGACTGCCAAGGCAGCCTTTGACGCGTCCAAGTACAAGTCTCAG
ATCTCAGCAGCCGAGCAGTCGCTAGCCGTGCTGGTGGCCGCAGTGCAGCACTCGTCGGTT
CTGGGGGTGGACCCGTTTGTGGAGGGCGTCAAGCAGGCCATCAACAATGTGGACATTGGA
GATCGGTCCAAGATTCTGACCGAGGCTCTCAAGAACGTGACTGTTCCCAGTGACGTCAAC
CTCACTCCTTATCTGGAGCAGATCACCGACAAGAGTTCCTAACTTGCAAGCATTTATCTA
ACGTTATTGATTATGGAAACGATAGACTATGGCCCGTAGGGTTGTATTGACATGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25509g_CDS-001

Protein length: 434 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F25509g_CDS-001 MYKYMTRAGSKVACRFTRNMSTQAHKSSPGKFRKLVRLTAGGCLVGYTAAVFFASRDERF
RDIFIEKFPFGRPIGEYFEEQEIKKNRDSPKPKPIPTSPSGQPNARTSHLSALYPDKSNP
NAMTNNPDGDSHQERKFNLERALSSKGTKKEYFDPLTENQGNFFDPSSGVVAEEHKEYLP
LILLHDSADHAARHSAMALNDLISSINTSIVTNDSVKNVSDSLIQLSEFVAVNHPEIQTQ
LSERLGEKARRFHALGEHYHTIIQDFLQNEVEHGPHQGHAAEVELTIYETDKMRDLRKNV
IQEIHDTEDLLVKYCNRYSRPEGPVAEVITRRVPTVETVTLEPIDSTAKAAFDASKYKSQ
ISAAEQSLAVLVAAVQHSSVLGVDPFVEGVKQAINNVDIGDRSKILTEALKNVTVPSDVN
LTPYLEQITDKSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG