YALI0F24893g

Overview

Description similar to uniprot|P00931 Saccharomyces cerevisiae YGL026c TRP5 tryptophan synthase
Locus type CDS
Locus tag YALI0F24893g

Location

Species Yarrowia lipolytica Positions 3221699..3224014
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2316 (nuc.)
Previous locus YALI0F24871g Next locus YALI0F24904r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24893g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24893gYALI0F24893g_mRNA-001YALI0F24893g_CDS-001

Nucleotide sequence

 

>YALI0F24893g
ATGTCTGCTCATCTGGCTGCCACTTTCGAGCAGTGCAAGAAGGAGGGCCGTCCCGCCCTC
GTTACCTTCGTCACCGCAGGATTCCCCTCTGTTGAAAAAACCGTGCCCATTCTCGAGGGC
CTCCAGACCGGAGGAGCCGACGTGATTGAGCTCGGCATCCCCTTCACCGACCCTGTTGCC
GACGGCCCTGCCATCCAGGCCGCCAACAATGTGGCTCTTGCCAACGGTGTCACCGTCCAC
TCGTGTCTGGACCTTGTCAAGCAGGCTCGAGCCAAGGGCGTCCACGTCCCCATTGTGCTC
ATGGGCTACTACAACCCTATCCACCATTTTGGTGACGAGAAGTTTGTCAAGGCTGCCCGA
GACGCTGGAGCCAACGGTTTCATTATCGTCGACCTTCCCCCGGAGGAGGCTGTTGCTTTC
AGAGGCCTCTGCACTCGTGAGGGTCTGTCTTACGTCCCTCTGGTCGCCCCCACCACCCCC
AACGACCGTCTTGAGGTCCTCGCTTCCATCACCGACTCTTTCATGTACGTCGTCTCGCGA
ATGGGCGTCACTGGCGCCACCGGCAAGCTGTCTACCGACATTGACGAGCTCGTGGCTAAG
GTCCGAAAGTACACTGGAGGCAAGCCTCTGGCAGTTGGCTTTGGAGTGTCCACCCAGGAG
CACTTCAACCAGCTGGCCCCCCTGGCCGACGGTATTGTCATTGGATCCAAGATCATTGCC
ACCATCGAGGAGTCCAACGGATCCCCCGAGGCTGTCGCCAAGTACCTGCAGTCTGTGACT
GGTGGACGAGCAGCCTCTGCCGCTGTGTCCAACGAAAACAAGTCCGACACTACCCAGGCC
GTCAACACCGACGAGGTGCTGCGAAAGTCTGTCTACCCTGCCCGATTCGGTGTTCACGGA
GGCCAGTACGTACCCGAGTCTCTGCACCGATGTCTGCTGGAGCTCGAGACTTGCGTCGAG
GAGGCCTTTGCTGATGAATCTTTCTGGGAGGAGTTCCGATCCTACTTTGCCTACATGAAC
CGACCCTCCTCCTTCCATGAGGCCGAGCGACTCACCGAGCACTGCGGAGGAGCCAAGATC
TGGCTCAAGCGAGAGGACCTCAACCACACCGGTTCTCACAAGATCAACAATGCCGTCGGT
CAGGTCATTCTTGCCAAGCGATTGGGCAAGAAAGAGCTCATTGCCGAGACCGGAGCCGGC
CAGCACGGTGTTGCTACCGCCACTGTTGCCGCCAAGTTCGGCATGAAGTGCAAGGTCTTT
ATGGGTGCTGAGGACGCCCGACGACAGTCTCTCAACGTGTTCCGTATGCGAATGCTTGGT
GCCGAGGTTGTCAAGGTCGAGGAGGGCTCCAAGACTCTGCGAGACGCCGTCAACGAGGCT
CTGCGATTCTGGGTCACCAACCTCGAGTCAACCCACTACGTCATTGGTTCTGCCATTGGC
CCTCACCCCTACCCCACTCTGGTGCGAACTCTTCAGTCCGTTATTGGCCGAGAGACCAAG
GAGCAGTTTGCTGCCCTCAACAACGGTGCTCTGCCTGATGCCGTTGTCGCCTGTGTCGGC
GGTGGATCCAACTCCTCCGGTATGTTTGCTCCCTTCGAGAACGACAAGTCTGTGCGACTT
GTTGGTGTCGAGGCTGGAGGAGACGGTATTGATACACCCGCCCACTCTGCTACCCTCACT
AAGGGCCAGGTCGGAGTGTTCCAGGGAGTCAAGACCTACGTTCTGCAGAACGCCGATGGT
CAGATCCAGGACACACACTCTATCTCCGCTGGTCTGGACTACCCCGGTGTCGGTCCTGAG
CTGTCCTACTGGAAGGATACTGGCCGAGTTGAGTTTGTTGCTGCCTCCGATGCCGACGCT
CTCAACGCCTTCCGACAGCTGACCCAGCTGGAGGGTATCATTCCCGCCCTTGAGTCGTCG
CACGCCATCCACGGTGCCATGGAGCTGGCCAAGAAGCTGCCCAAGGACAAGAACGTGGTC
ATCTGTCTCTCTGGACGAGGAGACAAGGACGTGCAGAACGTTGCTGAGCAGCTGCCCAAG
CTCGGTCCCAAGATTGACTGGGACCTGCGATTTGAGTAATAGATGCGAGCGTGGCTAACC
ACCACGCGTGTGCCTTTGGTTAGTTATAGACTGATCCAAAGTGCTACACATGAGTCCGCT
GAAATACTCGAATCGTTGTATTTAGTTACATAGTTCTTGAGTTTGTGTGAATAAGAGAAG
GAGAACAGAAGACCTAGTCCGAACGTCTCCGACCAGTAGTTATTGTTGCGTGATGTGCTA
GCTACAGTATGTAGTAGGAATATGAAGGTGAGGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24893g_CDS-001

Protein length: 693 aa.
Product: Tryptophan synthase, putative

>YALI0F24893g_CDS-001 MSAHLAATFEQCKKEGRPALVTFVTAGFPSVEKTVPILEGLQTGGADVIELGIPFTDPVA
DGPAIQAANNVALANGVTVHSCLDLVKQARAKGVHVPIVLMGYYNPIHHFGDEKFVKAAR
DAGANGFIIVDLPPEEAVAFRGLCTREGLSYVPLVAPTTPNDRLEVLASITDSFMYVVSR
MGVTGATGKLSTDIDELVAKVRKYTGGKPLAVGFGVSTQEHFNQLAPLADGIVIGSKIIA
TIEESNGSPEAVAKYLQSVTGGRAASAAVSNENKSDTTQAVNTDEVLRKSVYPARFGVHG
GQYVPESLHRCLLELETCVEEAFADESFWEEFRSYFAYMNRPSSFHEAERLTEHCGGAKI
WLKREDLNHTGSHKINNAVGQVILAKRLGKKELIAETGAGQHGVATATVAAKFGMKCKVF
MGAEDARRQSLNVFRMRMLGAEVVKVEEGSKTLRDAVNEALRFWVTNLESTHYVIGSAIG
PHPYPTLVRTLQSVIGRETKEQFAALNNGALPDAVVACVGGGSNSSGMFAPFENDKSVRL
VGVEAGGDGIDTPAHSATLTKGQVGVFQGVKTYVLQNADGQIQDTHSISAGLDYPGVGPE
LSYWKDTGRVEFVAASDADALNAFRQLTQLEGIIPALESSHAIHGAMELAKKLPKDKNVV
ICLSGRGDKDVQNVAEQLPKLGPKIDWDLRFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG