YALI0F24871g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F24871g

Location

Species Yarrowia lipolytica Positions 3218787..3221205
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2419 (nuc.)
Previous locus YALI0F24849r Next locus YALI0F24893g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24871g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24871gYALI0F24871g_mRNA-001YALI0F24871g_CDS-001

Nucleotide sequence

 

>YALI0F24871g
ATGAGCGAACAAGTGAGCCAAGTGAGCTGGGTGAACACAGACCCGTCCTTGTGGGAGTCC
CAGGTCGGCACCGGTCAATGGGGCATGCCTCTCATCTCCCGAGAGGTCTTTGGCGACACC
GACTTGCATTACCCCACTGTCAACAGCAGTCTGCCTCTATCGGAGGTCGGCCAGTCCTTG
ACCCTCTACGACACCGGGTTCCGGACCTTCACCAGCTCTACAGAGGGAGATATCGTCGAG
ACGGTTCGTAATCAAGCCGTGAACAAAAGTAAAATCCCTTTGGCCGAGATGCATGCCAAG
TTCGCTGAAGACCGAGAGTTGGGCTTTCGCAAGTCCAGCATGCTGTTTAGGGTCGATGTG
GGAACAAAGATGGCCATGGCCGACGTGGAATGGAACCATGGAGATACTGAGCATGTCGAG
GACACGAATTTCGCCACTTTCAGAATTATGGCTCATGCCAAGGGGAATGAGCTGATCATA
GAGAACGTTGCTCCTCAAGACCCATCTCTTGATCCGGCGTATGCCACCACCCGTGATGTG
TTTGACAAGTCACTCCCAAGCCTACATCATGTCAAGCAGCACGATTTCAAGCGCGAAATC
ACCCAGGTGCTGTTTGACAACCCTGCGGGAACGGGTAAACTTGCTACGCGACTTTTGGTA
CGAACTACAGGAGCTACTCATGTTGTGGACCTAAATGCTAATGTCCAAGAGCTGTTTACA
AGCATGGTTTCCACGTCCTACTTTGATCTCAGAGACGACAAGTACGTGGACTGTGATCTT
CAGGGCGACCTATACGCAGGAGCAACTGCAGATGGAACATGGCGAATACACCAGTTGGGA
ACAGAGCCGGAAGCTCATCCTCCAATTATTGCTCAGGGATACGATCCACGCTTTGAGGTG
CTTAGTGACTGGAAAAGTATCAAGCTGTTTGATGGAGGCAAGAAGATGGCCCTGGCTTCA
AGGAAAGGACTGCGGCTATATGCGATGAACAAGGAGGATATGGGAGCTGAACCGACTTTT
GTCGAGTTGTTTCAACAGCAGCATGCAGGCGACGTGATTATGGACATGAAAAGAGACCCC
AAGTACCCTAACTTGCTAGTTGTGCTTTCTGCGGTGCGAATGATGATCTTTGACCTTAAC
AAAGATACGCCTCTTCAGATCTCCCGAACAATGAACCTGCTGAGTGAGGATGCCTCCATC
AAGCTCTCCATGTCCCTGGTCGAAGGCAAGTCAATTGCCATTGTCCATTCTCAATTGTCT
CTTCAGAAGATATTCTACACATATGCATACCAGAACCCTGCAGAGCCACTTCTGCTAGAA
TGGACCTGTGACCCTTACCCTATTATGCTGTCTACACAAACACCTATCAATTCAACCCTG
CTGGTTGAGTTCCCAGGCGCTATTGACATGCTGTTCGATTGCGACATTGATGGATGTGTA
GTTCGCAAGCTTCTCACTAGTGAACCGTCCAAATTTCAAGACTACAAACCTGACCCAGTG
TGGAAGTTTCCTGGTCAGTACAAAAATGGTAAAGAACAAAACGTGAGAGTGTTCAGTTTT
GAAGGCTATGACGAGTTTATGCTACCGCCACCATTTCCAGAGCCCATTGGTGTGTCTGAG
ATTGCTGGGAAGCTTGATGGTCTCATCAAGACCTGGCACAAGGAAGGCTGTCCTGGCGGT
AGAACGTCTCTAGCTCAATTGGGAGCTGACGACACACCTTCGTCGATTGATGAGTTTGGG
GAGATGCTGGGCGAGTTGCAGAAACATTATAGCACCTCTGCGGTCCGGATCTTCCCAAAT
GTGGACCCAGTGAAAAAGTACGAGGAACTCATGAGTGTATACGTCACTCCCTCGACTGAC
ACATCTGATCGGGGCAATCCTCTTCTTGGAAAGTACCTCATAGAGTATCGCATCAAGACT
GAGCGTATGTGTCGTCGGTTGGCAGCTACGCTCTGCTACCTGACGTGTAGCGTACGTCGC
TCCAAAGAAGACAGAGGAAAGGAAAAGGACGTTCCGGTGCATATTACAAAGATGTTGGAT
GACTGGGTGATAGGTGCGCCTCCCAAAACCAACTACGATGATTGGGTCGAATTTGGAACG
CGCAAGAATAAGCGTAAGGCCCCTACTCAGCAGGAGCTGCTTTCCCAGATTGTTGCCAGC
AGAAACACGATTCCCACACTGTCTCTCTCGAGCCAGGCTCCTTCGCAGCGAGCATCTTTG
GCTCCGTCCAGCTCCCATCGCTCGTCGCTAGCTCGTGTTGCCTCTCAGGACACGAGAAGA
CAATCTGCTGGCCCCTCCGGTTCACAGGGCGGTTCTCAGAAGCGTTCCAAGCGAAGAAAG
ACTCTTGGAGGTTTCCGCTAGTATCTGTTTACTGTTCCTGTTTACTTGTATAATTATTGC
ATTTCAAAAATGGAGCGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24871g_CDS-001

Protein length: 787 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F24871g_CDS-001 MSEQVSQVSWVNTDPSLWESQVGTGQWGMPLISREVFGDTDLHYPTVNSSLPLSEVGQSL
TLYDTGFRTFTSSTEGDIVETVRNQAVNKSKIPLAEMHAKFAEDRELGFRKSSMLFRVDV
GTKMAMADVEWNHGDTEHVEDTNFATFRIMAHAKGNELIIENVAPQDPSLDPAYATTRDV
FDKSLPSLHHVKQHDFKREITQVLFDNPAGTGKLATRLLVRTTGATHVVDLNANVQELFT
SMVSTSYFDLRDDKYVDCDLQGDLYAGATADGTWRIHQLGTEPEAHPPIIAQGYDPRFEV
LSDWKSIKLFDGGKKMALASRKGLRLYAMNKEDMGAEPTFVELFQQQHAGDVIMDMKRDP
KYPNLLVVLSAVRMMIFDLNKDTPLQISRTMNLLSEDASIKLSMSLVEGKSIAIVHSQLS
LQKIFYTYAYQNPAEPLLLEWTCDPYPIMLSTQTPINSTLLVEFPGAIDMLFDCDIDGCV
VRKLLTSEPSKFQDYKPDPVWKFPGQYKNGKEQNVRVFSFEGYDEFMLPPPFPEPIGVSE
IAGKLDGLIKTWHKEGCPGGRTSLAQLGADDTPSSIDEFGEMLGELQKHYSTSAVRIFPN
VDPVKKYEELMSVYVTPSTDTSDRGNPLLGKYLIEYRIKTERMCRRLAATLCYLTCSVRR
SKEDRGKEKDVPVHITKMLDDWVIGAPPKTNYDDWVEFGTRKNKRKAPTQQELLSQIVAS
RNTIPTLSLSSQAPSQRASLAPSSSHRSSLARVASQDTRRQSAGPSGSQGGSQKRSKRRK
TLGGFR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG