YALI0F24717g

Overview

Description weakly similar to uniprot|C5JP18 Ajellomyces dermatitidis (Blastomyces dermatitidis) BDBG_04101 Grp1p, RNP domain-containing protein
Locus type CDS
Locus tag YALI0F24717g

Location

Species Yarrowia lipolytica Positions 3207342..3208685
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1344 (nuc.)
Previous locus YALI0F24695g Next locus YALI0F24739g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24717g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24717gYALI0F24717g_mRNA-001YALI0F24717g_CDS-001

Nucleotide sequence

 

>YALI0F24717g
ATGACCGTCAACGAGAACGACAACGTGCCCGTCCAGTCCAACACCCCCATTGAGGGCACT
GATGGACTGCGGCTTTTCTTCGGCAACCTCGATTTCCGAGTCTCTGCCCCTGAGCTCAAG
GAGTATCTTGCTGCTTACAATGTGTGAGTAAACTTAATCGCGCGTCGTGCGGCGATATCA
GATGGGGACAAATGGAGTACAGCTGGAGGGCTCGAAGCTGCCGTCCGTCACGCTTCTGGG
ATGTCCAATACTGGCCGATGGCTTGGTCCCCCATTTTTCTGCGATTTTTTGTCTCCCCCC
CCCCCATTGCCCCCCACATTTGCCACTACTAACCACAGACAACAGGTGACCATCCCCAAG
CGACGAGTCAGAGCCAAGACCACCAACAAGCCCTACAAGAAGGGCATGGGCTACGGTTTT
GCTCAATTCACCTCCACCGAGGACGCGAGCAAGGCTCTTGCCGAGCTCACGGACGCTACC
TGGAACGACCGAAAGCTCACCGTTAGTTTCGCCAAACCCAACCAGATTAAGAACGACGGC
GAGGATGGTGAGGAGGAGGCCTCTGCCGCTGATGGTGAGACCGCTGCCCCTCCCAAGAAG
AGCAAGCGAAACCGAAGATCAAAGAAGGAGAACTCTGCCGAATCTGGCGATGCCACTTCC
AACGGAACTTCGGCTGCCGGCACTGAGGCTTCCGAGACCAAGGAAAGCAAGCCCCGGGGC
CGACGACCTCCTCTTCCTCTTAACGAAGAGTCTCCCACTACTGATACCGTCTTCGTTGCT
GGTATCCCCCGAACGGCTACTGTTGCTGACATCAAGGAGTTCTTTGCTGCCGAGGAGCCC
GTGTCTGTGAAAATCAGCCAGCAGAATGTCTTCAACCGAAAGGATAAGACCCGAGAGCGA
GTCAACCGAGGTTTTGCTCTAGTCAAGTTTGCCGACGAAGCAACACGAGATGCCGTCATC
AAGAAGTACCACGAGCAAGAGTGGGATGGCCGAGTGATCCACTTGCGAGTCGCCCTTGAT
GTTCTCCAGACTGAGGGTGAGACCGACACCAACCAGGAGCCCAAGGAAGACCCCAAGGAA
GAGCCCAAGGAGGAGCCCAAGGAGGAGCCCAAGGAGGAGCCCAAGGAGGAGCCCAAGGAG
GAGCCCAAGGAGGAGGTCAAGGAGGAGCCTAAGGAGGATGCTGGAACCGAGGCTCCCACC
ACCACCGAGGACTCGACCCCCAAGGATGAGTAAGCATCTGCATAAATTTACTAATGGTTG
GAGTACTAATTGCTAACGTCGCTGATGGTTAGAATAGTTTAAATAGGAATAATCAGGTTA
AAAGGTACATTACAAGTATGCGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24717g_CDS-001

Protein length: 346 aa.
Product: Conserved hypothetical protein

>YALI0F24717g_CDS-001 MTVNENDNVPVQSNTPIEGTDGLRLFFGNLDFRVSAPELKEYLAAYNVQQVTIPKRRVRA
KTTNKPYKKGMGYGFAQFTSTEDASKALAELTDATWNDRKLTVSFAKPNQIKNDGEDGEE
EASAADGETAAPPKKSKRNRRSKKENSAESGDATSNGTSAAGTEASETKESKPRGRRPPL
PLNEESPTTDTVFVAGIPRTATVADIKEFFAAEEPVSVKISQQNVFNRKDKTRERVNRGF
ALVKFADEATRDAVIKKYHEQEWDGRVIHLRVALDVLQTEGETDTNQEPKEDPKEEPKEE
PKEEPKEEPKEEPKEEPKEEVKEEPKEDAGTEAPTTTEDSTPKDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG