YALI0F24695g

Overview

Description highly similar to uniprot|P29453 Saccharomyces cerevisiae YLL045C (ohnolog of YHL033C) RPL4B 60s large subunit ribosomal protein L7a.e.B, alternative splicing generates different translational starts
Locus type CDS
Locus tag YALI0F24695g

Location

Species Yarrowia lipolytica Positions 3204217..3205347
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1131 (nuc.)
Previous locus YALI0F24673g Next locus YALI0F24717g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24695g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24695gYALI0F24695g_mRNA-001YALI0F24695g_CDS-001

Nucleotide sequence

 

>YALI0F24695g
CCGACACAAAAATGGTAAGGACCAAAGAGAAGAGCTGTGAACAGCTCTGGCTCCGATGAT
GATGAAAAGAATGTGAGCAGATATCTCTGCAGCTCTGTCTGCTAGAGGAGGATTACAATG
TTACTCCATTACCGAAGTGACGTTACTGATGCTCCCCTAGGGGACCAGGCTGAGTCTCTT
ATGAGACTGTAGAGTGTTATATGTGAGCAGTTCGCAAATTTTTTAAGAACTAAATCCTAA
CCACTCAATGACACAGCCCGCCGCTAAAGGAAAGAAGGTTGCTCCCGCCCCCTCTGCTGC
CAAGGTCTCCAAGACCGAGGATGCTAAGAACCCTCTCTTTGAGAAGAAGGCCAAGTCTTA
CGGCATTGGTCAGTCCATCCAGCCTAAGCGAAACCTCTCCCGATTCGTCAAGTGGCCCGA
GTACGTTCGACTCCAGCGACAGAAGAAGATTCTGAGCATGCGACTCAAGGTTCCTCCTTC
TCTCGCTCAGTTCTCCAACACCCTGGACAAGAACACCGCTGCCCAGACCTTCAAGCTCCT
CAACAAGTACCGACCCGAGACTAAGGAGGAGAAGAAGGAGCGACTCACCAAGGAGGCCGA
GGCTATCGCCGCCGGCAAGGACAAGAAGGACGTCTCCGAGAAGCCCTACGTTGTGAAGTA
CGGTCTCAACCATGTTGTCTCTCTGGTTGAGAACAAGAAGGCCAACCTCGTCCTCATTGC
CAACGATGTCGACCCCATCGAGCTCGTTGTCTTCCTCCCTGCCCTCTGCCGAAAGATGGG
TGTCCCTTACGCTATTGTCAAGGGTAAGGCCCGACTCGGTACTCTTGTCCACAAGAAGAC
CGCTGCCGTCGTTGCCATTACCGAGGTCAAGTCCGAGGACCAGGCTACTCTTGCCACCCT
CGTCTCCACCATCGAGGCTAACTTCAACGAGAAGTACGACGAGTCTCGACGAAAGTGGGG
CGGAGGTATTCTCGGCCGAAAGGCTCTCGACAAGCTCGAGAAGAAGCAGAAGGCTCTCGA
TGCCGTCATCAAGATCTAAGTGTAGTCTTAGACCTGATGATTCCGTAAAAATAAAAGTAT
TGAGCATTTGTTCGACAGCCCCAGAGGCAATAAATTATTAGCTGAGATAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24695g_CDS-001

Protein length: 262 aa.
Product: Ribosomal 60S subunit protein L7, putative

>YALI0F24695g_CDS-001 MPAAKGKKVAPAPSAAKVSKTEDAKNPLFEKKAKSYGIGQSIQPKRNLSRFVKWPEYVRL
QRQKKILSMRLKVPPSLAQFSNTLDKNTAAQTFKLLNKYRPETKEEKKERLTKEAEAIAA
GKDKKDVSEKPYVVKYGLNHVVSLVENKKANLVLIANDVDPIELVVFLPALCRKMGVPYA
IVKGKARLGTLVHKKTAAVVAITEVKSEDQATLATLVSTIEANFNEKYDESRRKWGGGIL
GRKALDKLEKKQKALDAVIKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG