YALI0F24585g

Overview

Description weakly similar to uniprot|Q9P664 Neurospora crassa Related to protein-tyrosine-phosphatase
Locus type CDS
Locus tag YALI0F24585g

Location

Species Yarrowia lipolytica Positions 3195562..3197687
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2126 (nuc.)
Previous locus YALI0F24563g Next locus YALI0F24607r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24585g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24585gYALI0F24585g_mRNA-001YALI0F24585g_CDS-001

Nucleotide sequence

 

>YALI0F24585g
ATGCAAACAAAGTTAGGCTCAGACAATCGAAGACTTGAACTTGGGACACAGGAGCACTCA
GGAAGGAGGAGAGTAGCAAGTACCGACAGCAGTACAAGAACAAGTAGCAGCACACCAAAC
AGCAGCAGCACTAGCGTTCTCGACCAGCAGCAGCATCAGCAGCTACAGCTACATCAGCGC
CGTGCATCCCAGCATCAGCATCAGCATCCCTACGACTTCCCCACAACAGTAGGTACGTGT
ACCGACAGACTGACCGCCACTACCGAGCCCGGGCCCATGTCTGTATCGCCGTACTCTCCC
TGCTCGCCGGAGGTGCGATTCCCCATCAAAGAGCAGCCGTCATATTTCGAAGCTCCCTCG
GCCGTCACTTCAAATACACACACAATGAAGGCTCGCAGTCAATCGCCGACAACCGAGCAG
ATACCTCCACCAATAGCGCTGCCATCACTCCAGCTGCGTCGTCCCTCGCTACCCATCACT
TCGCTGGCTCGAGAAACGCCGTCCCAGATCCGGGCGCTGACTCCAGACCAGCTGGTGGAC
TTGCTACAGCAAGCTCCAGGCGCCACTGTGGTCGACATCAGACCCTACTGCGACTACACA
CTGTCGCGGGTGAAAGGCGCCCTTCATTTCTGCATCCCGTCCACGTTCCTCAAACGGGCC
TCCTACTCGTTCCGACGCACGGTCGACAACATGCTCCCCGAGCAGCGCCATGCCTTTGAC
AACCTGGCCGACCTGCCACCTCTGGTGATCTACGATCGCAGCAGCGAGCACTTACAGACT
TCTCAGAGCAACCTGTACCATACGCTGATGAAGTTTGTGACTGCTGAGGGCTGGCCTGCA
GACCAAACTGCCCACTACTTAGTCGGAGGCCTAGATGCCTGGAGCAGGAACGACAGAGTA
GCAGCAAACGGGCTACTTGACTCGGAAATGTATAAATGCGAGGGCCGACCACCAGAGTTT
GGAGCCATTGGATTCACTCGAGCCACAGCCAACCTCGCAGACGCAAACGCCATCCCCTTC
CCGCTCGTCACGTCGGGTCTGAGACAAAACCCGCTTTTCAAGTCCGTGCGGGCAGCAATG
GAGGTCCAGGACGATGAGTACATTGAAGTGCAACTGCCTGTGGACCTCGAGCCGTCAGAC
AACCACCCGGACTGGGTCAAGACGATTCTTAGTGACCCTCTGGAAGCCAGCAAAAAGATG
GCTGCCGAGTTCCGGAGTCTGGAGCAGGCGGAAAAGAACCGGATGTTCGGCGCGCTGTCC
ATTAAGAGCGACTCGGAAAACTACTTTGATCGACGTTACTCCATTTCAGGAATCGAACTG
GGCGTCAAAAACAGATACGACAACATTTATCCTTATGAACACACCCGGGTCAAATTGGCT
CGAAAAACCCAGGGATGTGATTACATTAATGCCTCGCACATTTCCTCAGCACACAGCAAG
CGGGTGTATATCGCCACCCAAGCGCCTCTGCCTGAGACGTTTGCAGACTTCTTCCACATG
ATCTGGGAGGAAAAGGTGCCTGTCATTGTGCAACTGGCTCCCGAGTTTGAGGGAGCCATG
CTCAAGTGCCATAACTACTGGGGCGAAGGAACGCATGGACCTTACACGGTGCGCGTGATT
GCCACCAGGAAGGAGGACGTGGACACCAAGGACAACATTGTGGCTACCATCCGGACATTT
GAAGTGTCACGAGAGGGCGTGGTGCGGCATGTGACGCAGATCTTCTACGATGCTTGGCCC
GATTTGGGCCGGCCTGCAAACCCCGCAGACCTCTTGAGGTTGATGGAGCTCAAGGACGGT
ATTTTGAAACATGCCAAGCTTCCCGTGGACGGTACCAAGGTGGTTGTACACTGCAGTGCC
GGGTGTGGCCGGACAGGTACTTTCTGTGCCATTGACATTGTGTGCGACATTTTGCAACGC
GGTGATCCTCAGTACCAGCATAAGGATGTGGTTGCCGAGGTAGTTGCCGAATTGCGAACC
CAGCGAACCTCAATGGTCCAAAGTCTGCGGCAGTATGTCTTGTGCTACGACTCTGTTCTT
GCCTGGTTGGCTAAGCGACAGTAGTCGGAACGCGTAAGTACGCAAGTATATATTTATTCA
TTCAATGCATCATTGTAGAGATTCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24585g_CDS-001

Protein length: 688 aa.
Product: Conserved hypothetical protein

>YALI0F24585g_CDS-001 MQTKLGSDNRRLELGTQEHSGRRRVASTDSSTRTSSSTPNSSSTSVLDQQQHQQLQLHQR
RASQHQHQHPYDFPTTVGTCTDRLTATTEPGPMSVSPYSPCSPEVRFPIKEQPSYFEAPS
AVTSNTHTMKARSQSPTTEQIPPPIALPSLQLRRPSLPITSLARETPSQIRALTPDQLVD
LLQQAPGATVVDIRPYCDYTLSRVKGALHFCIPSTFLKRASYSFRRTVDNMLPEQRHAFD
NLADLPPLVIYDRSSEHLQTSQSNLYHTLMKFVTAEGWPADQTAHYLVGGLDAWSRNDRV
AANGLLDSEMYKCEGRPPEFGAIGFTRATANLADANAIPFPLVTSGLRQNPLFKSVRAAM
EVQDDEYIEVQLPVDLEPSDNHPDWVKTILSDPLEASKKMAAEFRSLEQAEKNRMFGALS
IKSDSENYFDRRYSISGIELGVKNRYDNIYPYEHTRVKLARKTQGCDYINASHISSAHSK
RVYIATQAPLPETFADFFHMIWEEKVPVIVQLAPEFEGAMLKCHNYWGEGTHGPYTVRVI
ATRKEDVDTKDNIVATIRTFEVSREGVVRHVTQIFYDAWPDLGRPANPADLLRLMELKDG
ILKHAKLPVDGTKVVVHCSAGCGRTGTFCAIDIVCDILQRGDPQYQHKDVVAEVVAELRT
QRTSMVQSLRQYVLCYDSVLAWLAKRQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG