YALI0F23815g

Overview

Description weakly similar to uniprot|Q7S2D5 Neurospora crassa NCU05943.1 hypothetical protein
Locus type CDS
Locus tag YALI0F23815g

Location

Species Yarrowia lipolytica Positions 3122850..3125441
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2592 (nuc.)
Previous locus YALI0F23793g Next locus YALI0F23837g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23815g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23815gYALI0F23815g_mRNA-001YALI0F23815g_CDS-001

Nucleotide sequence

 

>YALI0F23815g
ATGGAGGTAGATGGAGCGGAGCCCGCAAGACGGCGGTCCACTCGAGCTACCCGAGGCAGA
CATTCCAAGTATGAGGAGGCTGTGGAGGAGCCCGGCAAGGTAAAGAGTGACAAGAAGGAC
CCCAAGACAAGCGACAAGAACCCCAAGACGACCAAGCTAAAGACACCAACCAAAGCTAAG
ACGACAACCAGATCTAAAGCGCGCAAAAAGAGCAAGAACGACGAGGAGGGAGTGGTCAGA
TGTCCCTGTGGAGCTACAGAGGACGATCCTTCTGACGGCAAGATCATGATTGAGTGCGAG
GACTGTCTGGAATGGCAGCATTCGCAGTGCGTGTTGCAAACCAATGATCTTGAGCAGGTT
CCTGATCATTACGTTTGCAACGAGTGCACTGAGAAGAAGACACAAGAGAAGGAAACCACC
GAAGCCCAAGAAGAGAGTGAAGATAAGGGCAAGGGAGAGGAGGAGAAGGACTCAAACGAC
AAGGATGAGAAATATGATTCCACATATGTTCCTAACAACGAGACAGCTGAGAAAGAACCT
GTGGCTAGAGTCTCGAAATCAACACACAAACGGGTGGGACATATCGATGATATCACCGAA
AAGGTGCGTAAAAGCGCTGCTTCGGCTCTCAAGGGCATCTTTGTGTCCGTTCCAACCTCC
AAATACTCTCCCGGAGCAGGCGTGTCTCCCGAGCAGTTTTGTGAGACGCTAGCTCTTACC
ATCGAACAGGAGCTGTACGACGCTTATGGAACAGTGGAGCCTGAGATTGGATCCAACTAC
AGAGACAAGTTCCGGACTCTCTCGTTCAACCTGCGTGACTCCAAGAACGAGACTCTCCGA
ATTCGGGTCATGACAGGCCAGGTGACACCCCAAACTCTTGTGGCAATGTCTTCTGAGGAG
ATGATGAATCCTGAATTGCAAAAGCTGGCCGAAGAGGTACGAGCAGAAGCTATCAGAGAC
ACAGTGCTTGTTGTGGACGAAGCTCCCCGGCTCAGACGCACTCATAAGGGTGAGGAGATT
GTTGGAGAGTACGAAGAGTACATTGACAATGTGGATCAGGCTCTGAAGATGGAAAGACAA
CGGGATGGAGACGGGAAAGAGGCTGCCGAGTCGAGAAATCAGATTGAACGAGCCGTCAGA
GATATCGAAGGTGCCAACGGCGAAGCGGACTCAAAGACTTCAAACTCCCCAAAAGAGTCT
TCCAACTCGCCAATAGTGCCCAAGTGGAAACGGGACATTGATCTGGCCCAGGGAGAGTCG
GATCATGAACATGATCACGATCACAATTCCGATCACGAAGATAAGGTGAATGGTATTCTT
GGAGATGTGTCTCGAGAGGCTCGAGAGGCTGAGACGGATGACTGGACTACTATCTCTGAG
GCTCCGTTTGTGTGGACGGGAACAGTACCTATGGCTGGACTCGACAAGACATCCTGTGCT
GCCTTTTCTCTGGGCTCTTCTTCGGTCCATTTCAACCCCAATGTTTCCTGGGGCTCCGTT
TTCTACGCCAGTAAGCCTCTTACTATCGAGGGTCGCTTGGATAAGTCAAAGGCCGATCCC
TATCTTAGCAAGGTACTTGGAGCCGGGACTAGAGACGTGGCAGCCTTTTGTTTGCTTCCT
TCAGATTCATCAGAGTCCGACAGAGAGGCGTATTATAAGTTGTATGAGTATTTCCACTCT
CGATCAAAGTATGGAGTGATTCATAACCGGTCGACGCTTGTCAAAGACGCGTATTTGATC
CCGCTGGCTCCCGATGATGCTCCTCCTTACACTTTGGGCTCTCTTGTGAAACCTAGTGTC
GAGCTGAGCAGTCTGAAACGGTCCAGACCGCTGCTGGTGGCTCTGTATATTGTTGGAAAG
CTGAGTCCCAAGCGAGGAGCAGCAGTTAGTGTGGAGTCCCATGTGGCTTCAAGCGAGAAG
CACCCTCCGAAACGACAGTCTATGAGAGATCGAGTGAAGCAGAATGCTGGCAATGCTGGA
AACGCTAGCAGACGTGCTTCGGACGCCCGAAAGAGTACACCTCCGGTTACTGCCACCCCA
GTGACTCCTGCTGCTCCTACTCTTGTTGCACCAGTGAATGCTCCTGTGGGTCCAGCTCCT
GTCGTCCCCCCTTATGCAGGATTTCAGGGAGGGGTATACGGAGCTCCTGTCGGCATTCAA
AGAGTGCCTGGAGCTCCAATGGGAGTACCTGGGGTGCCAATCGCTCCAGCTGGTATGCCC
GGAGTCCCCGTCGCCCCATTGGGTATGCATGGTGCTCCTGCACATCACATGGCCCAATCT
GGAACTCCTATCGCTCCCGCTGCCCATCCTCGCAAGCCTACTGGAGCTCCTCCCCCCGAT
CTGGACGCACTCAAAACGCTTCTGAACGATCCCAATCTCCGAAACGCTCCTGCTGCGCCT
GCTCAGAACGACCTGTTGCAGAACCCAGCTTTGTTGATGTCCATTATCGACCAGGCCAAG
AAGAGGTAGACGGAGAGCAAGGACAGCTCAAGGGCTTATTTATTCACGATGAAGAGGAGG
AGTGCTGCCCCGACCGCAAGCACCAGTCCACAAGTATGTATTGTATAGTATAATGAGATC
AAGATGAGTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23815g_CDS-001

Protein length: 823 aa.
Product: Conserved hypothetical protein

>YALI0F23815g_CDS-001 MEVDGAEPARRRSTRATRGRHSKYEEAVEEPGKVKSDKKDPKTSDKNPKTTKLKTPTKAK
TTTRSKARKKSKNDEEGVVRCPCGATEDDPSDGKIMIECEDCLEWQHSQCVLQTNDLEQV
PDHYVCNECTEKKTQEKETTEAQEESEDKGKGEEEKDSNDKDEKYDSTYVPNNETAEKEP
VARVSKSTHKRVGHIDDITEKVRKSAASALKGIFVSVPTSKYSPGAGVSPEQFCETLALT
IEQELYDAYGTVEPEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAMSSEE
MMNPELQKLAEEVRAEAIRDTVLVVDEAPRLRRTHKGEEIVGEYEEYIDNVDQALKMERQ
RDGDGKEAAESRNQIERAVRDIEGANGEADSKTSNSPKESSNSPIVPKWKRDIDLAQGES
DHEHDHDHNSDHEDKVNGILGDVSREAREAETDDWTTISEAPFVWTGTVPMAGLDKTSCA
AFSLGSSSVHFNPNVSWGSVFYASKPLTIEGRLDKSKADPYLSKVLGAGTRDVAAFCLLP
SDSSESDREAYYKLYEYFHSRSKYGVIHNRSTLVKDAYLIPLAPDDAPPYTLGSLVKPSV
ELSSLKRSRPLLVALYIVGKLSPKRGAAVSVESHVASSEKHPPKRQSMRDRVKQNAGNAG
NASRRASDARKSTPPVTATPVTPAAPTLVAPVNAPVGPAPVVPPYAGFQGGVYGAPVGIQ
RVPGAPMGVPGVPIAPAGMPGVPVAPLGMHGAPAHHMAQSGTPIAPAAHPRKPTGAPPPD
LDALKTLLNDPNLRNAPAAPAQNDLLQNPALLMSIIDQAKKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG