YALI0F23793g - HFD1

Overview

Description uniprot|Q6C0L0 Yarrowia lipolytica YALI0F23793g HFD1 Fatty aldehyde dehydrogenase, putative
Locus type CDS
Gene name HFD1
Locus tag YALI0F23793g

Location

Species Yarrowia lipolytica Positions 3119755..3121383
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1629 (nuc.)
Previous locus YALI0F23771r Next locus YALI0F23815g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23793g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23793gYALI0F23793g_mRNA-001YALI0F23793g_CDS-001

Nucleotide sequence

 

>YALI0F23793g
ATGTCTACCTTTGATTGGGAATCCATTGTGCCTGCCACTCCTCTCGACCAGATTCCTGGC
GACATCCAGCGACTGCGAAAGGGCTTCCGATCCGGAAAGACCCTCGATCTCAACTACCGA
CTGGACCAGATTCGAAACTTGCACTACGTCCTCAGAGACAATGTCGAGGCCATCAAGGAC
GCCGTGTACAAGGATCTCGGCCGACCCAAGCACGAGACTGACCTGTGCGAGGTGGGTTTC
CTGTGGGGCGAGTTTAACAACGTGGTTGCCAACCTCAAGAAGTGGGCCGCCGACGAGGAC
GTCAAGACCAACCTGCAGTACTCCATCTCCTCCCCCAAGATCCGAAAGCGACCTCTTGGA
AACGTGCTCATCATCTCGCCCTGGAACTACCCCTTTATGCTGACCGTGTCTCCTCTCATT
GGAGCTCTGGCTGCCGGTAACACTGTGGCTGTCAAGTTCTCCGAAATGGCCCCCCACACT
TCCAAAATTGTTGGCGACTTGTGCACCAAGGCCCTCGACCCCGACGTCTTCCAGGCCATC
CAGGGAGGTGTCCCCGTCGTCACCAAGACCCTCGAGCAGAAGTTCGACAAGATTATGTAC
ACTGGTAACCACACTGTCGGTAAGATCATTGCCACTGCCGCCAACAAGTACCTGACACCC
GTCATCCTCGAGCTCGGAGGTAAGTCGCCCGTTTTTGTCACCAAGAACTGCAAGAACATC
AAGCTTGCCGCTAAGCGAGCCCTGTGGGGTAAGGTGGTAAACGCTGGCCAGACCTGTGTG
GCTCCCGACTACGTGATTGTCGAGCCCGAGGTGGAGCAGGAGTTTATCGACGCCTGCAAG
TACTGGATTAACGAGTTCTACAGTGGTAAGATTGACCAGTACAACCCCGACTTTGCCAAG
ATCGCCACCCCCAACCACTGGAACCGACTTACCTCCATGTTGAGCAAGTCCAAGGGAGAG
ATCATTACTGGAGGTAACACTGACGAGAAGACTCGATTCATCGCTCCTACTGTCGTCGCA
AAGGTCCCCGACAATGATTCCCTGATGGAGGACGAGATTTTCGGCCCTCTTCTGCCCATT
CTCACTGCCCGATCCGTCGAGGAGGGTATCAAGTACGTGCACGAGAACCACGACACCCCT
CTTGCCATGTACGTCTTCACTGACAAGGCCTCTGAGGGCGACTACATCCAGTCCCAGATC
AACTCTGGTGGCCTTATCTTCAATGACACTCTGATCCACGTTGGATGTGTCCAGGCTCCG
TTTGGTGGTGTCGGCATGTCCGGTTACGGTGCTTACCATGGCGAGGACTCCTTCCTGGCC
TTCACCCACCGACAAACCTACCTCAACCAGCCCAAGCTTCTGGAGCCTCTTCAGGACGTG
CGATACGCCCCCTACACCAAAACCAAGCGAAGCATGGTCAAGAACCTGCTGCTGGTCGGC
CCCATTTTCCCCCGAACCGGCTCCGTATACCCCAACGTGCTGATCCGAATCTTCCGAAAG
ATTTGGTTCTGGGTCCTTATTGTCGCCATCGGAGCTGCTGGTGCCAAGGCTCTGCTCTAG
ACTAACCCTACTTCCTCATAGAATGATTATATATATACACACAATGACAAGAATGTGAGT
GAAACCAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23793g_CDS-001

Protein length: 520 aa.
Product: Fatty aldehyde dehydrogenase, putative
Gene: HFD1

>YALI0F23793g_CDS-001 MSTFDWESIVPATPLDQIPGDIQRLRKGFRSGKTLDLNYRLDQIRNLHYVLRDNVEAIKD
AVYKDLGRPKHETDLCEVGFLWGEFNNVVANLKKWAADEDVKTNLQYSISSPKIRKRPLG
NVLIISPWNYPFMLTVSPLIGALAAGNTVAVKFSEMAPHTSKIVGDLCTKALDPDVFQAI
QGGVPVVTKTLEQKFDKIMYTGNHTVGKIIATAANKYLTPVILELGGKSPVFVTKNCKNI
KLAAKRALWGKVVNAGQTCVAPDYVIVEPEVEQEFIDACKYWINEFYSGKIDQYNPDFAK
IATPNHWNRLTSMLSKSKGEIITGGNTDEKTRFIAPTVVAKVPDNDSLMEDEIFGPLLPI
LTARSVEEGIKYVHENHDTPLAMYVFTDKASEGDYIQSQINSGGLIFNDTLIHVGCVQAP
FGGVGMSGYGAYHGEDSFLAFTHRQTYLNQPKLLEPLQDVRYAPYTKTKRSMVKNLLLVG
PIFPRTGSVYPNVLIRIFRKIWFWVLIVAIGAAGAKALL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG