YALI0F23639g

Overview

Description weakly similar to uniprot|C4R1E4 Komagataella pastoris Scaffold protein responsible for pre- autophagosomal structure organization
Locus type CDS
Locus tag YALI0F23639g

Location

Species Yarrowia lipolytica Positions 3104405..3105682
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1278 (nuc.)
Previous locus YALI0F23617r Next locus YALI0F23661g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23639g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23639gYALI0F23639g_mRNA-001YALI0F23639g_CDS-001

Nucleotide sequence

 

>YALI0F23639g
ATGGAACAACTATTTCGGGAGGCCCAGGACGCTCTGGCGGCTGCAGGGCCACTGTGTCAA
GAATCACAGGACGTCTTGGCACGCGCACGACAGAATTTGGAGGTTGCAGTCCATCTTGGC
ATTCGCACACAATTCCTGGCCAAGGCACACGCCCATCAATGGACGCTGGCGTCGAAATTC
TACTCTAACGCCCTCACACGCACAAAGAAGTCTCTCGAAACGGTTACCCGGCAGCAGACA
CGGTTTCAGGCAGCGAGGGGAGCTCTGGAGGAAGCTCTAGGCGAGTTGGCTGCAACTCCT
GTGCAATTGAGAGTCAACAATGGGGCTCACAATCTGAGAGAGTTTGTGGACGAAGATCTC
ATTTCCGCTCAGGTTCAAGGCAAGGGATGGAACGAAGTGCATGAGGAGGCGCTCAATGTG
TTTCGAGTGCTGTTGCCAGAGATTCAGAGACACGGAGATATTGTGAATCGTTCCAAGAAG
GAGTTTGAGAGGGAGAAGGCTGAACAAACCGAACTTCTCATCCACCAAACATCAGATTCG
GGCATCTACGACTTGCTGAATTCGGCAGAAGCATGTTCGGAAGACATGGCTAACCTATTA
CAGTCGCTAGCTCGACATTACGACTTGTGTGAACGAGGGCAGGATCTGAGTACTGGCGCT
ATCGAGGCAGAGGACGTTAATGAGCTGGGTGAGTTGCGCGCGGTTCTTGAGAACGACGCT
CAACAACTTCCAGATGTGTTGGACGAGCTACAAGAGCGCCTGGACGAGGTCAAGCAGGGA
TGTCAAGGTGTCCACAATCACATGACTCAGATGTACCACTCCTACTCGCTGGAAGTGCGC
CAGCTCGAGGGCATCCAAGCTGTCGAGAAGACCATGGATGCTACACTCGAGATCTGTGAG
ACTCAACAAAGGGATACAAAGGAGTATCTTCTGAAGGTGCAGCGGTATGTGAGTGAAACA
TCAGCTGTTGTGACGCATTACCAGACTTTCTTGAACTCATACAAGGCCCTATTGCACGAA
GCAGAACGAAGAAATGCAGCCGAGGCCAAAATGAAAGATTATGTGACCGAGGTGAACGCG
AAGCTGGCTCAGATGAGTATCCAGGAGACTAATAGACGTCAAGACTTTGTAGCCCAGCAA
GGTGACTATCTGCCAGCAGATATTTGGGACGAGCTGTTGCTACCCTCTAGAAGATTCGAG
GCAAGAGAATTGGATGGGGAGTTATAGATGGGAGTTACTAAGAATATCTACATTATTTAT
TTATTTCATTGATCTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23639g_CDS-001

Protein length: 409 aa.
Product: Conserved hypothetical protein

>YALI0F23639g_CDS-001 MEQLFREAQDALAAAGPLCQESQDVLARARQNLEVAVHLGIRTQFLAKAHAHQWTLASKF
YSNALTRTKKSLETVTRQQTRFQAARGALEEALGELAATPVQLRVNNGAHNLREFVDEDL
ISAQVQGKGWNEVHEEALNVFRVLLPEIQRHGDIVNRSKKEFEREKAEQTELLIHQTSDS
GIYDLLNSAEACSEDMANLLQSLARHYDLCERGQDLSTGAIEAEDVNELGELRAVLENDA
QQLPDVLDELQERLDEVKQGCQGVHNHMTQMYHSYSLEVRQLEGIQAVEKTMDATLEICE
TQQRDTKEYLLKVQRYVSETSAVVTHYQTFLNSYKALLHEAERRNAAEAKMKDYVTEVNA
KLAQMSIQETNRRQDFVAQQGDYLPADIWDELLLPSRRFEARELDGEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG