YALI0F23309g

Overview

Description some similarities with uniprot|F1QLP6 Danio rerio serine/arginine repetitive matrix 2
Locus type CDS
Locus tag YALI0F23309g

Location

Species Yarrowia lipolytica Positions 3056852..3057796
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 945 (nuc.)
Previous locus YALI0F23287g Next locus YALI0F23331r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23309g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23309gYALI0F23309g_mRNA-001YALI0F23309g_CDS-001

Nucleotide sequence

 

>YALI0F23309g
ATGTCGTACAACGGAATAGGTCTGTCCACTCCCCGTGGATCGGCTACTTCGGGTCATATT
CAGACCAACATCTCCAACAGAGCGTTTCAGAGCACTAACCACAGAGGCGAATTTGCACAC
CATGAGATGACGGACGAGCAAGACAAACGATTGAACAAGAAGCTGGACAGAGACTACGCA
GCTGACCGACAGGCTGACGTGGAGCTGCTGGAACATGAGCGAAAACGCAAGGTGGAGGTA
GCATGCATGGAGCTCCAGGACAAGTTGGAGGAGGAGGGACAGAAGGGAGAGGAGGAGATT
GAAGAGGAGGTGAACACCCTGAGACGTCAGCTGACACTCAAGATGGCTCGGGAACTCGAT
GTGAGAACCACCATTGTTTCTGCGGATCGAGAAGCTCTGCGAAAGAACTACCACAAGGCA
GCCGTCATCAAACAGCAGGAAATGGATCGAATGAGAGACGCCTTTGATACCACAAAGAAC
CTGGATGACCGAGGACGTGACCGGCCACGAAACCGACAGCGACAAAATCGAGAAAAGTCG
CCCGTCAGGGACACAAGACGATCTAGAAGTGCTCGAGAACGATCTCCCTCCCGAAGAGGA
AGACGTCCAAGACGGTACTCTGTTACTGAAGATGTGAGAACCTCTGAGGTGATTTCTGAG
CGACAGGGATCAGGATCGCCATGCCGGAGAGCTGACTCTCGATCCAGATCTAGAAGTCCC
GAGAGAGGCTCCCGACGAAAAAGCTACAGAGAAAGATCTCGATCTCGATCCCGAGAAAGA
AGTGAGAGAAGAGGAAGACGAGACAGCGTCAGAGAGAGGGAGCAAGACAGATCTCGATCT
CCATTACCCTACTAGTAGACCCTCCATTAACAGCATAATATGTTTGCGCAATGCCAAGTA
TGTAAGGCTATATGAACAACGGACATAACAAAGCTGATCTACAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23309g_CDS-001

Protein length: 285 aa.
Product: Conserved hypothetical protein

>YALI0F23309g_CDS-001 MSYNGIGLSTPRGSATSGHIQTNISNRAFQSTNHRGEFAHHEMTDEQDKRLNKKLDRDYA
ADRQADVELLEHERKRKVEVACMELQDKLEEEGQKGEEEIEEEVNTLRRQLTLKMARELD
VRTTIVSADREALRKNYHKAAVIKQQEMDRMRDAFDTTKNLDDRGRDRPRNRQRQNREKS
PVRDTRRSRSARERSPSRRGRRPRRYSVTEDVRTSEVISERQGSGSPCRRADSRSRSRSP
ERGSRRKSYRERSRSRSRERSERRGRRDSVREREQDRSRSPLPY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG