YALI0F23045g

Overview

Description weakly similar to uniprot|P25655 Saccharomyces cerevisiae YCR093w CDC39 nuclear protein
Locus type CDS
Locus tag YALI0F23045g

Location

Species Yarrowia lipolytica Positions 3020549..3027035
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 6487 (nuc.)
Previous locus YALI0F23023g Next locus YALI0F23067g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23045g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23045gYALI0F23045g_mRNA-001YALI0F23045g_CDS-001

Nucleotide sequence

 

>YALI0F23045g
ACACACCAAAAACCAGACATCAAGACACATTTACTACGAGTAGTCACGCTGGTAATCGAC
ACAAACAAGTGAGTGCGATGGCTGAGGGATGAATCACATGACAGATCCGATCCGATCCCG
CGATATGCCTTCTTCCAAACACGTTACTGACACAGACATCTATACAGATCAGCACACGAA
CCCCCATATTACAGTGATAACGTCGGGTGTACAAGTGAGTGATAGTGATGGCATGCGATG
GCGACGACAGTGACGACAAAAGGAATTTGCGGCGACTAACACAGTGACTATTGCATCTTT
GTCCAACCGGACAAATCTCTCGGAATCAGACATCAACGAGCTGGTGACGGGCAAACTATC
CCCCGCAGACATTACAGAGGTGCTCAAGCGTGGAGTCCAAAATGCCAAGTGGGATGGCCT
CGGCGTGGGCAAGGGACTGGTAGCCAAGCTGCCTGACCTCAACAAATGGAAGGAGGCCAT
CGACGGACTAGACGAGGAGGACAACGACAACAACAACAATAGCAACAGTTTCAACATTGG
CTCATCCGATGGCCTCGCTGTTCTGCTGCGAATTCTGCTTGCTGGAGACCCCAATGGCTC
TCTGGTTGCATACTTTTATCAGCGACGTCGATGGCAACGACTGGCTCTGCAAGTGCAGTT
GATGAACGCTACAGCTGGCATTTCGCGAGAGCGACACCAGCTGGACCTCGCCGGATGCGG
ACTCACCAAAATCATCTCTTCGTCCGTCATCCCCCCGGCCATGGCTGCCGCTGATTCGCC
CATGAAACCCATCGTGGTGGCCCTAGAGGCGTCCCCCCTCAACCTGGTGGATCTGGTGCG
GCTCACTTTCGATGCCATTGAGCGGGAGACCGTGGCCGAGTCGGCCGCCAAGGACTTCCT
CGACAAACACGCCAAGGTCACACCCGAGCTCTTCTTTCTGGGCTCGCTCAAGACCCCCAA
GCCGTGGTCACCTCTGCTGGAGCGTGTCATCAAGAACTTCTTTGATCTCTTCTTCTCCGG
TCACAACTCTTCAATCCTGGTCTTCTCTATTTTGGGCCAGCAGGACGAGGCCTTCCTGGC
ATCCATGGTTGTGGAGTACTACCGGGTGAGTGCTCTCAACGTGGGCAAGATTCTAGACAT
TTGCCACGCCGCCAACATTCTGCCCCATGTGTTGCAGCTGCGATACTTTGCCTTCACCAT
GGATCTGGCGGTGCTGGCCTCCCAGCGCCAGCTGTATCCACTCAAACAGTTTATGGACGA
TACATACAAGGCCGTGGGAGCCGACTTTGTGCGGGGCGTGTTGGACTTTTTGGAAATGAA
GATTAGCGTCGAGCTATCTTCCCAGGCCGGTGTCGGTGTTCCTCCCCCTCCTCCTCCTCA
GAACCCCCTCACTCTCAGCTCTGTGGCCACCATTCTACAGTTTGTGTCCTCGGGCTCCGA
TATGCCTGCCGACCGACTGGAGCAGTTCAAGATGCTGCAGACCCAGACCTTCCAAGTGTA
CCCTCGCCTCATCAACTTTGGCCAGGGTCACGACCAAGCCATTCTGGCCCACGGCGACGG
CTCGAACGCCTTCCCTCCTCACATTGAGCGGGAGATGAAGCTGTGTTACCAGCGAATGTA
CGAGGAGCAGATTCAGATCCGCGACATCATCACTATGCTGCAGCGGCTCAAGCAGAGCGA
CGATCCCCAGGACCAGGACGTGTTTGCATGCATGGTCCATTCGCTGTTTGACGAGTATCG
ATTCTTCCCCGAGTACCCTCGAAACGCCCTTGCTGCTACTGCCGTCCTGTTTGGTGGCCT
CATTTACTTCCGGCTCATCCAGGACATCCCTCTGTCCATTGCACTGCGATACGTGCTGGA
TAGTTTGAAGCAGCCCGCCGATTCCAACATGTTCAAGTTTGGTTTGCAGGCACTCTACGA
GTTCAGGGAGCGGCTCAACGAATTCCCCACCTACTGCTCCATTCTTGCTGAGATCCCAGG
TCTGCAGTCTCACCAGGAAATTTACTCTTACGTGAAGCAGCTTGCTGGCGGACCCGGGGG
TGGACCTGGAGGACCTGGTGTTGGTGGACCTCCTCCTGGTGTCCCTGGCGGACCTGACAA
CTCTCTCGCCCCCGAGACCCTCATCTTCTCATCTATTCGAGTCGACTCCAACTTGCCTGA
GGATGCTGCGCAGGTGGAGCCCCCAGAGGAGTTGTCTGACAAGGTGCTGTTCATGGTCAA
CAACCTTGCTCAGAGCAATGTAGTTGCTCGGTCTCGAGAGATGGCCCAGGTGCTAGAGGA
GCGGTACTTCCGATGGTTTGCTACCTACATTGTGCGACATCGTGCAAAGCAGGAGCCCAA
CTACCACTCCCTGTACATTTCCATGCTCAAGAACATGTCAAACAAACTGCTTGAGAGCTT
CTTCCTGCGGGTGACCTACCTGCAGATTGTCAAGCTTCTCAACAGCCCCGAGACGGTCTC
TTCTTCCACGGACCGAAACCAGCTTCGTAACCTGGGCCAGTGGCTCGGAGCTCTGACTCT
AGGCCGAAACCTGCCCATCAAGCACCGAAACATTTCGTTCAAGGCGCTGCTGGCAGAGGG
CTACAAGCATCAGAAGCTGGTACTGGTGATTCCTTTTGTGGCCAAGGTGCTGGAGCGGGC
CGCCAAGTCTAAGGTGTTTGCTCCCCCAAACCCCTGGACACTGGGTATCATGCACGTACT
TGCAGAGCTGTACCATCACGCCGAGCTCAAGCTGAACCTCAAGTTTGAGATCGAGGTATT
GTGCAACCAGCTCAAGCTCAATGTTGAAGAGCTGGAGCAGAGCCACATTATTCGAGGTGG
CTCTTCTGCCGTTGACGAGGTTGTTGACGGTGTCAGCAAGCTTAATGTTGATGCTGCCAA
CGCCGGCATGGTTCCCCCTGGCGCCATGGGCATGCATGCAGGCATGCCTCCTCCTCGAGG
CATGCACATGCCTGGTGGCATGGGTGGTCCTGGTGGCATGATGGGCCCTGGTGGTCCCGG
AGGCATGGGTCCTCTTGGTATGGGTCCTGGCATGCCCCCTATTCACGGCCCTCCTGGTGT
CAACCAGCAGCAACAGCAACAGCAGGCTCAGCAGCAGCAGGCTCAGCAGCAGGCCCAGGC
TCAGGCTCAGGTTCAGCAGCAAGGTGGGGCCCCTGGCGTTGGAATGAGAGCCGCTGGAGC
CGCAGTTGCCTCTGCCGCTTTTTACGATGCCTACCAGAACATCATTATGTCGATGGAGCT
TCAGGGCGACTCTCCGTTTGTGTCGCACCCAACTCTCAAACAGCTGTTCATGCTGTCAGT
TGACAAGGCCGTTCGAGAGGTGCTCCAACCCGTGGTGGAACGATCGGTGTCTATTGCCAC
CATTGCCACCCGGGAGTTGGTTACCAAGGATTTTGCATTTGAGGTAGATTGCGACAAGCT
GCGACGAGCCGCCCACAATGTGGTTCGAATGCTGTCTGGATCGCTGTCTCTGGTCACCTC
CAAGGAGCCTCTTAAGGACTCCCTGCTCAACAACCTCAAGACCCTCCTGCTGGGCCAGGG
CTATGGAGAGGAGACCCTTCCTCTAGACCAGATGGCCGCTGCCGTGGCTGCCAACGCTGA
CGCCATCTGCTGCGTTGTGGAGAAGGCTGCTATTGACAAGTCGCTGCTGGACATTGAAGA
GGCCCTTGCTGCCTCTTACGCTCTGCGACAGGCTCATCAGGGTGACGCTGCCTCGTTTGT
GGACCCCCAGGTAACTCGGTTCAACCTGCCCCTGCCAGATCCTCTGCGAATCCAGCCCGG
TGGTGTCACTCCTCAGCAGATGGCGCTCTACGACTCTTTCAGTGAGGGCGGAGCTGGATT
GCCCAGCGTTCCTGCTGCAATGGCTGCGGTTGCTGGTCCTGGTGGTCAAGGAGCTGCTGC
CGGCGTGCCTGCTCCTTCCACCCCCGAGACACCTCAGGCTGTGCTGTCGCAGATTCTGCT
GACTGTTCAGGCTCGAATCGACGCTCTGCTGCGAAGCATTAGCGCTGTGACCGATGGATC
TGCAGGCCCCGTCCCCACCTCTCTAGTGGAACTTCCCGCTGACCACGAGATTCGAGTTCG
TCTGCTGCAGCTTCTGTCTCTGGTGAGCAAGAGTCCCTACCAGAACGAGGTTGTACTGCG
AACCTCTCAGCTAGTGGTCAACGCTCTGTTCACCCAGTCCGACTCCCAGCTCTCACATGA
GTCATTTGCTCTGCTTCTGGGTAAGCTGTGCGAGCTTTCTGCTGAGACCTGCAAGGAGGT
ACTGCTTTGGCTCATCCACTCTTCTGACAAGCGGAAGTTTAACGTGCCTGTGGTTGCCAC
TTTGCTGCGGACTCGGTTCATCACTGTCACCGAGCTGGATCAGTCTCTGGCCAAGCAGAT
GCTTGAGTCGCGGGATGTAGCTGCTGTCGAGTTCACTCACAAACTCATTGCTGACGTGGT
ACTTGGCGCAGATCCCTGTGCTCTGCGAACCGACTTCTCTTGTTGTCTGATTGTCCTTGA
GGCTCTCATCAAAGAGAACAAGGAGGGCAAGGATGAGTCCAAGGAGGAAGCAAAGACCAA
GGAAGAAGGTAAGGAGGTCGAACCCGAGTTGTCCGAGGAGGAGAAGAAAGCCAAGGAGGC
CAAGGAGGCCGAGAACAAGGAAAAGCTTGCGGCTGCTGCCACAGAGGCTGCCAAGTGCAT
CACAACTCTTAACGACACCAACGTGGTGATTCCCACCATCACAGAGCTGTCTGAGTCCAC
TCGTGCTTCTCGAACTGACGCCTCCCAGGTGTCTCTTAAGGAGCAGTGTGCCTACATCTT
TGCTGAGTGGCTGCGACTTGTGGGCCACCCTGGAGCCTGTAACAATCTGCGAATGCGGTA
CATGTTTGTTTTACAGCTTTCTGAGATCGGTATGCTATCCAACCCTGACCACCTCTGTGT
GCTTGTGCGGACTGCAACCGAGATCTCTGTCAAGTCGTACTGCTTTGAGATGGTTGACAA
GCCTGCTGCCCCTGTTGGAGATGTTGCTGTTGCTGTGGATGGTCTGGCCAAACTACTAGT
GACCATTATTTCTGCCCACGAGGCAACCAACGCCAAGCGGATCAGCGCCTTTGTGCGACA
GCTGCTGGCTGTGGTGGTGCTGGTATTTGCTGGTGATCATGAGGCCAAGTCCGGAGGCGA
GTCTCCCGTCGGATTTAACGAGAAGCCTTATTTCAGACTTTTCTCGTCCATTCTTTGCGA
GCTAAGCGAGGCTGAGCTGAGCGCCGAGTCTCGAGACGCCATCTACTTGTGCCTTGCAGA
GACGTTCAAGCTCATCCAACCCATGGCTTTCCCTGGCTTTGCATTTGCCTGGATGACTCT
GATCTCGCATCGAATGTTCCTGCCCAAGATGATGGACGTGGTCAGAAATCGACGAGGCTG
GGGCCCTTATCTATCTCTGCTGGAGGCCCTACTCAAGTTCCAGGACCACTTCACCACCGA
CAAGGAGTTCAACGAGCACGTGGCTGTCATGTACAAGGGTACTCTTCGAATTATGCTGGT
GATCCTCCACGACTACCCCCAGTTCCTCATCGAGAACCACTACCCGCTGTGCAATGTGAT
TTCGCCCTCGTTCATCCAGTTGCGAAACCTCGTGTTGTCAGCTTTCCCTGCCGATCTCGA
GCTGCCCGACCCTCTCACAGTTGGTCTCAAGGTCGAATCGCTGGCTGAGATCAAGGCGGC
CCCTCCTCTGGCTATTGACCCTGGCCACGAGGCCCAGAAGCATGGCATCCGAAAGCTCAC
CGACATGTATCTGAGAAACCCGTCGCCTGCCATCATCAAGAACCTACTCAAGGCCTTCTA
TCTGCCTTCTGCCAAGCCTTGCCTGGGTCTTGGTTTCAACGAGATCTCCGTGGATTCCAC
TGCTCTCAATGCTCTGGTGCTGTACATTGCCTCGTTGATCTCCACCGCTACTTTTGATAC
TTCTTCGCCCCACCTGTCTCTGCTGACATCTGTGGCAGTGGCTTTGGACGCCGAGGGACG
ATACTTCTTGTTCGAGGCCATTGCCAACCAGCTGCGGTACCCCAACAGACACACCTACTG
GTACTCTTGTGTGATTCTGTCGCTCTTTGGCGCTCATGGCGAGGCCAGCCTGGGTTCCGG
CAAGGTAGACATTCAGCACATTATCACTCGGGTGCTGCTTGAGCGAATCATCTGCAACCG
GCCTCATCCTTGGGGTCTGATGATCACTTTTGCTGAGCTGCTCAAGAACCCCAGTTACCG
GTTCTGGGACCTGGAGTTCACAAAGGGCTCTCAGGAAATTGAAAAAATGTTTGCCTCACT
CAACAGCCATATAATGCCTACCGAGGGAACAGAATAGGTGTACCGACTAGATCGGAGGAG
GAAATTTATTTATTAATGTATTGTATTATGAATGATGAACCAGCAATGCCTATAAAGGTT
AGTCGGATTGAGAACATGAAAACATAGCTAGGTATATAGATACTGTATATTAGATGTTTT
TTCCTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23045g_CDS-001

Protein length: 2018 aa.
Product: Conserved hypothetical protein

>YALI0F23045g_CDS-001 MTIASLSNRTNLSESDINELVTGKLSPADITEVLKRGVQNAKWDGLGVGKGLVAKLPDLN
KWKEAIDGLDEEDNDNNNNSNSFNIGSSDGLAVLLRILLAGDPNGSLVAYFYQRRRWQRL
ALQVQLMNATAGISRERHQLDLAGCGLTKIISSSVIPPAMAAADSPMKPIVVALEASPLN
LVDLVRLTFDAIERETVAESAAKDFLDKHAKVTPELFFLGSLKTPKPWSPLLERVIKNFF
DLFFSGHNSSILVFSILGQQDEAFLASMVVEYYRVSALNVGKILDICHAANILPHVLQLR
YFAFTMDLAVLASQRQLYPLKQFMDDTYKAVGADFVRGVLDFLEMKISVELSSQAGVGVP
PPPPPQNPLTLSSVATILQFVSSGSDMPADRLEQFKMLQTQTFQVYPRLINFGQGHDQAI
LAHGDGSNAFPPHIEREMKLCYQRMYEEQIQIRDIITMLQRLKQSDDPQDQDVFACMVHS
LFDEYRFFPEYPRNALAATAVLFGGLIYFRLIQDIPLSIALRYVLDSLKQPADSNMFKFG
LQALYEFRERLNEFPTYCSILAEIPGLQSHQEIYSYVKQLAGGPGGGPGGPGVGGPPPGV
PGGPDNSLAPETLIFSSIRVDSNLPEDAAQVEPPEELSDKVLFMVNNLAQSNVVARSREM
AQVLEERYFRWFATYIVRHRAKQEPNYHSLYISMLKNMSNKLLESFFLRVTYLQIVKLLN
SPETVSSSTDRNQLRNLGQWLGALTLGRNLPIKHRNISFKALLAEGYKHQKLVLVIPFVA
KVLERAAKSKVFAPPNPWTLGIMHVLAELYHHAELKLNLKFEIEVLCNQLKLNVEELEQS
HIIRGGSSAVDEVVDGVSKLNVDAANAGMVPPGAMGMHAGMPPPRGMHMPGGMGGPGGMM
GPGGPGGMGPLGMGPGMPPIHGPPGVNQQQQQQQAQQQQAQQQAQAQAQVQQQGGAPGVG
MRAAGAAVASAAFYDAYQNIIMSMELQGDSPFVSHPTLKQLFMLSVDKAVREVLQPVVER
SVSIATIATRELVTKDFAFEVDCDKLRRAAHNVVRMLSGSLSLVTSKEPLKDSLLNNLKT
LLLGQGYGEETLPLDQMAAAVAANADAICCVVEKAAIDKSLLDIEEALAASYALRQAHQG
DAASFVDPQVTRFNLPLPDPLRIQPGGVTPQQMALYDSFSEGGAGLPSVPAAMAAVAGPG
GQGAAAGVPAPSTPETPQAVLSQILLTVQARIDALLRSISAVTDGSAGPVPTSLVELPAD
HEIRVRLLQLLSLVSKSPYQNEVVLRTSQLVVNALFTQSDSQLSHESFALLLGKLCELSA
ETCKEVLLWLIHSSDKRKFNVPVVATLLRTRFITVTELDQSLAKQMLESRDVAAVEFTHK
LIADVVLGADPCALRTDFSCCLIVLEALIKENKEGKDESKEEAKTKEEGKEVEPELSEEE
KKAKEAKEAENKEKLAAAATEAAKCITTLNDTNVVIPTITELSESTRASRTDASQVSLKE
QCAYIFAEWLRLVGHPGACNNLRMRYMFVLQLSEIGMLSNPDHLCVLVRTATEISVKSYC
FEMVDKPAAPVGDVAVAVDGLAKLLVTIISAHEATNAKRISAFVRQLLAVVVLVFAGDHE
AKSGGESPVGFNEKPYFRLFSSILCELSEAELSAESRDAIYLCLAETFKLIQPMAFPGFA
FAWMTLISHRMFLPKMMDVVRNRRGWGPYLSLLEALLKFQDHFTTDKEFNEHVAVMYKGT
LRIMLVILHDYPQFLIENHYPLCNVISPSFIQLRNLVLSAFPADLELPDPLTVGLKVESL
AEIKAAPPLAIDPGHEAQKHGIRKLTDMYLRNPSPAIIKNLLKAFYLPSAKPCLGLGFNE
ISVDSTALNALVLYIASLISTATFDTSSPHLSLLTSVAVALDAEGRYFLFEAIANQLRYP
NRHTYWYSCVILSLFGAHGEASLGSGKVDIQHIITRVLLERIICNRPHPWGLMITFAELL
KNPSYRFWDLEFTKGSQEIEKMFASLNSHIMPTEGTE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG