YALI0F23023g

Overview

Description similar to uniprot|D5GC95 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F23023g

Location

Species Yarrowia lipolytica Positions 3015823..3018876
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3054 (nuc.)
Previous locus YALI0F22979r Next locus YALI0F23045g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23023g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23023gYALI0F23023g_mRNA-001YALI0F23023g_CDS-001

Nucleotide sequence

 

>YALI0F23023g
ATGTCTGAGCAGCCAAACTCATATCTGGGCTCCTCATTCTCTGAGTCGCCTCTCCAGCGT
TTGGGCGGACGGTCCTACTCACGAAGACCGTCCATTCTCATTCCACCATCAGTGCCCAAC
ATGAACGAAGGCCTCCGACACCAGAGTGCCGAGCTAGCCAATATGGCGCTCGAAGAAGGT
ATGGGAACCTCGCCATCTAACAACGACCGTCCCAAATCCTCCGGATCAGCACAGAGCTAC
TCTATGCACGGCTCCTCTCTGTCTCGACAGCTAGCCAACGAACCGCTACCGATTCCAGAT
GTGATCGAAACTCCCGGGCTGAGCAACACAGAGCGAGATCCGCTACGGCCAAAGAAGTCA
GCCGAATCAAAGAAATCAGCACAATCGACCATCACAGCGTCCAGAAGAGACTCACACCGA
CAATACCACACGTTTGGATGTCCCGACATCGAAACTGGCGACGTGAACCATGGAGGACCA
AGACGAGGACTCAGCGGATGGTTCAAGAGACTGGAGGAAAAGATCAAAAATACCTCATCA
GCAGACATGCTCGACGAGTGCATCAAGAAGCCAATATCATACCTGCCCTCAGTAGTGCTG
GGAACTCTCCTCAACATCTTGGACGGTCTGTCGTACGGAATGATTCTGTTCCCGCTATCA
GAGCCCATTTTTGCACATCTGGGTCCTGCAGGTCTGTCAATGTTCTACATGAGTTGTGTC
GTTTCGCAATTGGTCTACTCACTGGGAGGATCTGCTTTCAAGGCTGGTATTGGATCCGAA
ATGATTGAGGTCGTGCCCTTTTTCCATTCCATGGCATACACCCTAATGGCCGAGATCAAG
GAGCCAGAGCGGGTGATCCCTACTGTTATTCTCGCGTTTGCAACCTCCTCTGTCGTAACC
GGGCTGGTGTTTCTGGCGCTGGGAGCTGCCCGTCTAGGATCACTCATTTCCTTCTTCCCT
CGTCATATTCTTGTGGGATGCATTGGAGGTGTAGGATGGTTCCTGTGCGTAACGGGTATT
GAGGTGTCCTCCCGAATGGACGGTCCCCTGGAATACACATTTGCAATTCTCAAGTTTCTG
CTGGACCCCCAAATCCTTCTCATGTGGAGCACTCCTTTGGCCCTCGCATTAGCCCTGCTT
CTCATCCAACGATTCTCTCACCATCCACTGATTGTGCCCTCATACTTCTGCGGTGTTTTT
GCCATCTTCCATCTGCTGGTGTGGGCTATTCCTTCATGGAACCTGCAAATGGCTCGAGAT
AATGGCTGGGTGTTCTCTGCCCAGGCCACTAGCGAGCCCTGGTGGTACTACTACACTCTC
TACGACTTTGGAAAGACAGACTGGGCCGCTCTGTTGAAAACCGTGCCTGCCATGTTCGCC
CTGACCTTCTTCGGTATTCTGCATGTTCCCATCAACGTGCCTGCTCTCGCTGTTTCCACT
GGACAAGAGGACATCAACGTGGATAGAGAACTGCTTGCTCACGGCATCAGTAACGGTCTC
AGTGGTCTGATGGGATCCATTCAAAACTACCTGGTCTACACTAACTCGGTCTTGTTCATC
AAGTCTGGAGCCGATTCTCGAGTGGCTGGTGTCATGCTCGCCATTGCTACGGCTGGTGTT
ATGTTCGCCGGTCCTGTAGTCATTGGTTTCATCCCCGTCTGTGTAGTTGGTGCCCTCATT
TTCTTGCTGGGCATTGAGCTTCTGATTGAAGCTCTGGGTGACACTTGGGGCCGACTGTCT
CGGTTCGAGTATATCACTGTGTTGGCAATTGTGCTCACCATGGGTATTTTCGACTTTGTC
TACGGTATTCTGTTTGGTATTGTGTTGGCATGCTTCTCATTTGTTATCCAATCTTCTCAG
AGATCGGTCATCAAGGCTACATACACTGGAGCCGTGGCTCGATCCACCGTTCGACGTCAC
GCTACCCAACAGAAGTTTCTTCAGGAGTGTGGTAACCTCATCTACCTGCTCAAGCTTTCT
GGATACATGTTCTTCGGTACCATTGTGCGTGTGGAGGATACCATCAAGCAGCTCATGGAT
GACGCACAATTCAAGGAGTCTCCTTTCCGATACCTCATTCTGGATATGACTGCCGTTTCT
AACATCGACTTCTCTGCTGCCGAGGCGTTCATCCGTATCAAAAAGCTGCTGGATAGCAAG
AACGTTTACCTAGTCATGTCTGGTATTGGATCCAACTCTCCCATCTCATCCGCTTTGGGT
GCAGTTGGCCTTTGGAAGGGTTCTTGCACGCAGGGAACTGATGTTCGGCTGTTCTCTAAC
TTGAACGAGGCCCTAGAATGGTGCGAGAATGAGTTCTTGAGTCTCTACTACAGTGCCCGC
GACGATGCTGCCTCTCCTACCACTCCAGGCACACCCACTGATATCCCTACCAATACTTCT
GGTAACCGTAAGAATGCGCTTGCTGTGCTTTCTTCATCTCCTGGCTACTCTGCATCTCCC
CGACTGAGCATGATCCATCGGGCTGCCACTAACAACGTCAAAGACGACCCTATAATGAAG
TGGAACAACTTCAAGCAGCCGTTGCCTCTACTGCTTCAGGTGTCCCAGGGTCTTACCAAT
GAGAACGAGGACTTTTGGTTCCGAATCTGCGCATTCTTCAAGAAGGAGGTGCTTCCCAAG
GGTCACGTTCTGTACACTGCCAACCAATCTCCCACCGGATTCTACCTTGTACAAAGCGGT
ATTCTGAGAGCAGACTACGACATGCAGCAGGGTCGACTTTACGAGACGATTCTGGCTGGT
ACCACATGTGGAGAACTGCCGTTCTTCTCCGAGACTTATAGAACAGCAACTGTCACAGCA
GAGGTGGAGACCACTGTTTGGAAGATGGATGCCGAGTCGTGGAAGCAGCTCCAGCAGCTC
GAGCCTGATGGACAGGTGCTTGCCAACGAGCTTCTGAAAGTGGTTCTGAAGCTGACGGCT
GAGAGATTCGAATCCATTACCAAGTACGTTCTCATCAGTGCCAACTAGGGGTAGGAATTT
TGATGATAGTTGATAGTTTATGCATATTTAATTGTAATTTAACAGTTCTCTCTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23023g_CDS-001

Protein length: 996 aa.
Product: Conserved hypothetical protein

>YALI0F23023g_CDS-001 MSEQPNSYLGSSFSESPLQRLGGRSYSRRPSILIPPSVPNMNEGLRHQSAELANMALEEG
MGTSPSNNDRPKSSGSAQSYSMHGSSLSRQLANEPLPIPDVIETPGLSNTERDPLRPKKS
AESKKSAQSTITASRRDSHRQYHTFGCPDIETGDVNHGGPRRGLSGWFKRLEEKIKNTSS
ADMLDECIKKPISYLPSVVLGTLLNILDGLSYGMILFPLSEPIFAHLGPAGLSMFYMSCV
VSQLVYSLGGSAFKAGIGSEMIEVVPFFHSMAYTLMAEIKEPERVIPTVILAFATSSVVT
GLVFLALGAARLGSLISFFPRHILVGCIGGVGWFLCVTGIEVSSRMDGPLEYTFAILKFL
LDPQILLMWSTPLALALALLLIQRFSHHPLIVPSYFCGVFAIFHLLVWAIPSWNLQMARD
NGWVFSAQATSEPWWYYYTLYDFGKTDWAALLKTVPAMFALTFFGILHVPINVPALAVST
GQEDINVDRELLAHGISNGLSGLMGSIQNYLVYTNSVLFIKSGADSRVAGVMLAIATAGV
MFAGPVVIGFIPVCVVGALIFLLGIELLIEALGDTWGRLSRFEYITVLAIVLTMGIFDFV
YGILFGIVLACFSFVIQSSQRSVIKATYTGAVARSTVRRHATQQKFLQECGNLIYLLKLS
GYMFFGTIVRVEDTIKQLMDDAQFKESPFRYLILDMTAVSNIDFSAAEAFIRIKKLLDSK
NVYLVMSGIGSNSPISSALGAVGLWKGSCTQGTDVRLFSNLNEALEWCENEFLSLYYSAR
DDAASPTTPGTPTDIPTNTSGNRKNALAVLSSSPGYSASPRLSMIHRAATNNVKDDPIMK
WNNFKQPLPLLLQVSQGLTNENEDFWFRICAFFKKEVLPKGHVLYTANQSPTGFYLVQSG
ILRADYDMQQGRLYETILAGTTCGELPFFSETYRTATVTAEVETTVWKMDAESWKQLQQL
EPDGQVLANELLKVVLKLTAERFESITKYVLISAN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG