YALI0F22715g

Overview

Description weakly similar to uniprot|Q7S6J1 Neurospora crassa NCU04844.1 hypothetical protein
Locus type CDS
Locus tag YALI0F22715g

Location

Species Yarrowia lipolytica Positions 2992463..2993805
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1343 (nuc.)
Previous locus YALI0F22693g Next locus YALI0F22737g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22715g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22715gYALI0F22715g_mRNA-001YALI0F22715g_CDS-001

Nucleotide sequence

 

>YALI0F22715g
ATGGCGCCGCAAGGACGGAAGGGACAGGCTTCTGGGCAGAAGTCAGATGGTGCGAAAAGA
ACTCGAGCCACTAGAAGGAGTGTGGATCGAAATAATCACGTCGATCTGAAGAATGGTCAG
ATTACACCCAAGATCGAGGATGAGGTCGACAAGGGTGAAAAATCCGAAGAACAGTCACAA
GACGAGAACGGCAACGAACCTGCCACCAATGAAAGTATCCCAGAGGATGATTCGGAACCT
GACTCCGAGGAAATCCCTTCTGGTGAGTCATCTCCAGATAATAGTGCTGACGAGTACATG
GAGGATAGTGAACCAGAGAAGAGTAACGAGGATATTTCTGAGCCAGCAACTAAGAAAAGC
AAGTACTTTGCCGATTCTGATGATGAAGAAGAGACTGATATACCCACTTCCCATATACCT
TACTCCAACATGGCTCTACACCCTAACTCGCTGTCCTTCATTCAAGTCCTAGAAAAGAAC
AATAATCGAGAGTGGTTCAAATCACATGATGCCGAGTTCAAAAAGGCCAAACAAAACTGG
GACACTTTTATCCTTTCCTTGGCAGCTTTGTGCCACAAGAACCACCCCGAACATGTGCCT
GCTGAGATTCCTCTCATCAAGCTGCAGTTTCGAATCCATAGAGACATGCGATTCTCAAAC
GGACTGCCCTACAAGCCTCGTTGGATGGGTGGATTCAGTCCTACCGGATGCAAAGGTATA
TTCCCAAAATACTTCCTTGTCGTCTGGCCCTCTCATGTGGTCGTGGGGGCTGGATACAGC
GCCATGGGAGATGCTGATGTCGGTCCTAAGACGTTGAAAGGACTCAAGGATGAAATTCAG
GAAACTGAGGGCGAATGTATTGCTAAGATCCTTCGAAAGGTGCAAAAGAAGTCTGCTGGT
CTGGTATTCAAAAGCAGATTCGATGATGCAGAAGGTCTCATGAAGGAGTTTCTGGAAATG
AATGTGACTGAGAACATGTACAAATACGTTCCCAAGGGCTATGACGCTGAGTCTCCCGCT
GCTGGATTACTTAAGTTGAGATCTTTCGTGATTAAAATCCAGCTGGAGACTACAGTGGTG
ATGGAAAAAGACGGCGCCCAGATCATGGCCAGCTACTTCAAGTTCCTGATCCCGTGGGTC
AAATTTCTTAGCAAGTACTTTCCTCCAGGCCGGGGTGGCTAACTGTATATATGTGATGGA
ATAGATTTCGTTTTGAATGATTCTACATGTGCGATAGCACAGGTTTGTCTTTCAAATTGT
GACTTCCTGACAGGACCAGATGCATTTTGGCTACAATGTGAACATGTATGTACTTATTCT
AATAATATTAACCGTCCTATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22715g_CDS-001

Protein length: 394 aa.
Product: Conserved hypothetical protein

>YALI0F22715g_CDS-001 MAPQGRKGQASGQKSDGAKRTRATRRSVDRNNHVDLKNGQITPKIEDEVDKGEKSEEQSQ
DENGNEPATNESIPEDDSEPDSEEIPSGESSPDNSADEYMEDSEPEKSNEDISEPATKKS
KYFADSDDEEETDIPTSHIPYSNMALHPNSLSFIQVLEKNNNREWFKSHDAEFKKAKQNW
DTFILSLAALCHKNHPEHVPAEIPLIKLQFRIHRDMRFSNGLPYKPRWMGGFSPTGCKGI
FPKYFLVVWPSHVVVGAGYSAMGDADVGPKTLKGLKDEIQETEGECIAKILRKVQKKSAG
LVFKSRFDDAEGLMKEFLEMNVTENMYKYVPKGYDAESPAAGLLKLRSFVIKIQLETTVV
MEKDGAQIMASYFKFLIPWVKFLSKYFPPGRGG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG