YALI0F22671g

Overview

Description similar to uniprot|O94513 Schizosaccharomyces pombe Eukaryotic translation initiation factor 3 subunit 6 (eIF- 3 p48)
Locus type CDS
Locus tag YALI0F22671g

Location

Species Yarrowia lipolytica Positions 2988882..2990260
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1379 (nuc.)
Previous locus YALI0F22649g Next locus YALI0F22693g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22671g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22671gYALI0F22671g_mRNA-001YALI0F22671g_CDS-001

Nucleotide sequence

 

>YALI0F22671g
ATGGAGTACGATCTGACACAGAAGACGCTGCCCTTTTTGGACCGACATCTCATCTACCCT
CTGCTCCAGTTCCTCAAGGGCCGAGGTGTTTACAACGACACAGAGCTGCTCCAACTCGAG
TATGACCTGCTCAAGGACACCAACATGACCGACTATCTGGTGGAGCTGAGCAAGGAGCTT
GGCCAGAACGATGCCGATCTGCAGGCAAAGAAGGAGAACGTTGTCAAGACCCTGGCCGAG
CTGGAGGAGGCCACCAAGCCCGTGTTTGAGGTGCTTGAGAACCCCGAGGTGGTTTCCGAG
CTCAAGGAGAACAAGACCCAGAACCAGGCTCTGCTGACCTCAAAGTACGGTCTTTCTGTC
GAGCAGATCAATCTGCTCTACAAGTTTGGACAGTTCCAGTACAACGCCGGCCGATACCAG
GCTGCCTCCGACATTCTGTACCATTTCCGAGCTCTGTCCACCGACCCCGAGCTGGTTGCA
TCTGCCACTTGGGGCCGTTTCGCCTGCGAGATCCTCACCTCTCAATGGGACAGCGTTCTT
GAGGAGCTTGGAAAGCTGCGAGACTCCGTTGACTCGCGATCTCTGGACCCCCAGCAGCAG
CTGCACCAGCGAATGTGGGTCATCCACTGGTCTCTTTTCCCCTTCTTCCAGAACGACACC
AAGGGTAAGGATGCTCTGTGCGACCTCTTCTTCTCCTCTTCCTACATCTCCACTATTCAG
GCCGCTTGTCCTTGGATTCTGCGGTACCTGGTGGTTGCTGTGATTGCCGGCGGCCATCCT
CACACTGCTTCTGTCTTCCAGAAGCGACTCAAGGACCTCGTCCGAGTCGTTGGACAGGAG
GAATACGAGTACCAGGACCCCCTTACCCGATTCGTCAAGTCTCTGTACATTGACTACTCC
TTTGAGGATGCCCAGAACCAGCTTGCTGACTGTGAGAAGGTGCTGAAGCAGGACTTCTTC
CTCGCTGACTCCGCTGACGCCTTCCTCGAGTCTGCCCGAAAACTTATGTCCCAGGTCTAC
TGCCGAGTTCACCAGCGAGTTGACATTGCTCAGCTGTCTCAGACCCTCAACCTGTCCCAG
GAGCAGGGCGAGAAGTGGATTGCCAACCTCATCAAGGACTCTCGAATGGACGCCAAGATT
GACGAGAGCGACTCCACCGTCATCCTCAACCACCCTTCGGTGTCGGTCTACCAACAGGTC
ATCGAGAAGACTAAGGGGCTGACCTTCCGGTCTTCCCAGGTTCTCAACCAGGGAGTTACC
ATCTAGACAGCCCCCGGGCTGTTTTTGTTTAAGGTGTTGCGGTCGGCTTAGACTGCAGTG
GGATAGCATTAGAAGGAAAATGTATGAAATAGAATGAGTGTATTGGCTTACTATGAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22671g_CDS-001

Protein length: 422 aa.
Product: Translation initiation factor 3 subunit 6 (eIF-3 p48), putative

>YALI0F22671g_CDS-001 MEYDLTQKTLPFLDRHLIYPLLQFLKGRGVYNDTELLQLEYDLLKDTNMTDYLVELSKEL
GQNDADLQAKKENVVKTLAELEEATKPVFEVLENPEVVSELKENKTQNQALLTSKYGLSV
EQINLLYKFGQFQYNAGRYQAASDILYHFRALSTDPELVASATWGRFACEILTSQWDSVL
EELGKLRDSVDSRSLDPQQQLHQRMWVIHWSLFPFFQNDTKGKDALCDLFFSSSYISTIQ
AACPWILRYLVVAVIAGGHPHTASVFQKRLKDLVRVVGQEEYEYQDPLTRFVKSLYIDYS
FEDAQNQLADCEKVLKQDFFLADSADAFLESARKLMSQVYCRVHQRVDIAQLSQTLNLSQ
EQGEKWIANLIKDSRMDAKIDESDSTVILNHPSVSVYQQVIEKTKGLTFRSSQVLNQGVT
I*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG