YALI0F22649g

Overview

Description some similarities with uniprot|Q9UTM0 Schizosaccharomyces pombe Hypothetical zinc-finger protein
Locus type CDS
Locus tag YALI0F22649g

Location

Species Yarrowia lipolytica Positions 2986890..2987971
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1082 (nuc.)
Previous locus YALI0F22627g Next locus YALI0F22671g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22649g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22649gYALI0F22649g_mRNA-001YALI0F22649g_CDS-001

Nucleotide sequence

 

>YALI0F22649g
ATGTCTGAGATGTCAAGCTCCGAACTGTCTTCGGACGGATACTCGTCCGTGCCGTCCATA
GCCCACCACATGGACTCGGACGACGACGTATACAACCCCAAGCCCCAGATTTGTCACTGG
GTGGGCTGTGAGACCCAGGTAGCCAATCTGGACGCTCTGGTCGATCATCTAAACGAGGTG
CATTTTGGAGCCCGCAAGAGCAAGTACCAATGTGATTGGGCTGGCTGCTCGCGACAGGGT
ATGGTCCAGCCGTCGCGATTCGCGCTGGTATCACACATGCGAAGTCACACTGGAGAGAAG
CCCTTCTACTGCTCTGTTCCCGAATGCGACAGAAATTTCACCCGAAGTGACGCTCTGGCC
AAACACATGCGAACCGTGCACGAAACCGAGCAATTGCGACCAAGCGACCCGCAATTCAAG
ACCCATCACAGTGGAGTAATTGGCAATGTGGATGCGGTGGTGGAGCATTTGGAGCCTAGA
AGTCTGCACACTCTTGCCACGACTCTGGAGAATGAAACCCGGACCATGGGACGAACCAAC
GAGGTGCAGAAGATCACGGACATCGTCAAGGACACCATACCAGTGCTCAGAATCATGGAG
TACCCGGAAGATGGGGACTTACAGACGATGCCCTCAGAGACCCTGAAAACACTGTACCAG
GACCTCAAACGCAAGGAGGCGTGGGCGCTGCAGCTGCAAAATGACCTGCAGAAGGAGCTC
AAGATCGGAAATAGAAAGAGACGGCGACTGTGGCTGGAAAAGGAGGGCTTGCTGGACAAA
ATCATGAACTTTGCACCCGAAGGAGCCGTGCGAGAGGCGATGATTTCTTCCTCGGTGAAG
AACGAACCTCTAGAAGCATCACTTGAGCTAAGCTCATCGAAAGAAAACAAGGATCCGCCA
GCACCGGTGCCTGTGCTTGAGCCCAACTACTCTTCTTCCCAGAGCCATGTCAATGGAAAC
GGCGTTTCTGGAGAAACCACCAAAACTGAAGCTGCTGATCCAGCTCAGAGTTAGTCCTTT
TTCTCCTTCTGAAGGAACTCATTTCATGCCTTCACTATTTATAACAATGTATTTTTTCAC
CT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22649g_CDS-001

Protein length: 338 aa.
Product: Conserved hypothetical protein

>YALI0F22649g_CDS-001 MSEMSSSELSSDGYSSVPSIAHHMDSDDDVYNPKPQICHWVGCETQVANLDALVDHLNEV
HFGARKSKYQCDWAGCSRQGMVQPSRFALVSHMRSHTGEKPFYCSVPECDRNFTRSDALA
KHMRTVHETEQLRPSDPQFKTHHSGVIGNVDAVVEHLEPRSLHTLATTLENETRTMGRTN
EVQKITDIVKDTIPVLRIMEYPEDGDLQTMPSETLKTLYQDLKRKEAWALQLQNDLQKEL
KIGNRKRRRLWLEKEGLLDKIMNFAPEGAVREAMISSSVKNEPLEASLELSSSKENKDPP
APVPVLEPNYSSSQSHVNGNGVSGETTKTEAADPAQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG