YALI0F22539g - PEX3

Overview

Description uniprot|Q874C0 Yarrowia lipolytica YALI0F22539g PEX3 Peroxisomal biogenesis factor 3 (Peroxin-3)
Locus type CDS
Gene name PEX3
Locus tag YALI0F22539g

Location

Species Yarrowia lipolytica Positions 2977991..2979423
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1433 (nuc.)
Previous locus YALI0F22517g Next locus YALI0F22561g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22539g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22539gYALI0F22539g_mRNA-001YALI0F22539g_CDS-001

Nucleotide sequence

 

>YALI0F22539g
ATGGATTTCTTCAGACGGCACCAGAAAAAGGTGCTGGCACTGGTAGGTGTGGCGCTGAGT
TCCTACCTGTTTATCGACTATGTGAAGAAAAAGTTCTTCGAGATCCAGGGTCGTTTGAGC
TCGGAGCGAACCGCTAAACAGAATCTCCGGCGCCGATTTGAACAGAACCAGCAGGATGCA
GATTTTACAATCATGGCTCTGCTATCCAGCTTGACGACACCGGTAATGGAGCGTTACCCC
GTCGACCAGATCAAGGCAGAGTTACAGAGCAAGAGACGCCCCACAGACCGGGTTTTGGCT
CTCGAGAGCTCCACCTCGTCCTCAGCTACCGCACAAACCGTGCCCACCATGACAAGTGGC
GCCACAGAGGAGGGCGAGAAGTCGAAAACACAGTTGTGGCAGGATCTCAAGCGAACGACC
ATTTCCCGAGCGTTTTCTCTTGTCTATGCAGATGCACTTCTTATTTTCTTCACGCGTTTG
CAGCTCAACATTCTAGGACGACGAAACTACGTCAACAGTGTTGTCGCTCTGGCGCAGCAG
GGCCGAGAGGGTAATGCCGAGGGTCGAGTGGCGCCCTCGTTTGGTGATCTTGCAGATATG
GGCTATTTCGGCGACCTTTCAGGCTCGTCCAGCTTCGGAGAAACTATTGTCGATCCCGAT
CTGGACGAACAGTACCTTACCTTTTCGTGGTGGCTGCTGAACGAGGGATGGGTGTCGCTG
AGCGAGCGAGTGGAGGAAGCGGTTCGTCGAGTGTGGGACCCCGTGTCACCCAAGGCCGAA
CTTGGATTTGACGAGTTGTCGGAACTCATTGGACGAACACAGATGCTCATTGATCGACCT
CTCAATCCCTCGTCGCCACTCAACTTTCTGAGCCAGCTGCTGCCACCACGGGAGCAGGAG
GAGTACGTGCTTGCCCAGAACCCCAGCGATACTGCTGCCCCCATTGTAGGACCTACCCTC
CGACGGCTTCTGGACGAGACTGCCGACTTCATCGAGTCCCCTAATGCCGCAGAGGTGATT
GAGCGACTTGTTCACTCCGGTCTCTCTGTGTTCATGGACAAGCTGGCTGTCACGTTTGGA
GCCACACCTGCTGATTCGGGTTCGCCTTATCCTGTGGTGCTGCCTACTGCAAAGGTCAAG
CTGCCCTCCATTCTTGCCAACATGGCTCGACAGGCTGGAGGCATGGCCCAGGGATCGCCG
GGCGTGGAAAACGAGTACATTGACGTGATGAACCAAGTGCAGGAGCTGACCTCCTTTAGT
GCTGTGGTCTATTCATCTTTTGATTGGGCTCTCTAGAGGCTCATTCACGAAAGACACGAA
GAACGAAGATGGGGACTGAATACAGCGCTCTCATTTGTACACAAATGATTTATGACAGAG
TAACTTGTACATCATGTAGAGCATACATACTGAAGGTGTGATCTCACGGGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22539g_CDS-001

Protein length: 432 aa.
Product: Peroxisomal biogenesis factor 3 (Peroxin-3)
Gene: PEX3

>YALI0F22539g_CDS-001 MDFFRRHQKKVLALVGVALSSYLFIDYVKKKFFEIQGRLSSERTAKQNLRRRFEQNQQDA
DFTIMALLSSLTTPVMERYPVDQIKAELQSKRRPTDRVLALESSTSSSATAQTVPTMTSG
ATEEGEKSKTQLWQDLKRTTISRAFSLVYADALLIFFTRLQLNILGRRNYVNSVVALAQQ
GREGNAEGRVAPSFGDLADMGYFGDLSGSSSFGETIVDPDLDEQYLTFSWWLLNEGWVSL
SERVEEAVRRVWDPVSPKAELGFDELSELIGRTQMLIDRPLNPSSPLNFLSQLLPPREQE
EYVLAQNPSDTAAPIVGPTLRRLLDETADFIESPNAAEVIERLVHSGLSVFMDKLAVTFG
ATPADSGSPYPVVLPTAKVKLPSILANMARQAGGMAQGSPGVENEYIDVMNQVQELTSFS
AVVYSSFDWAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG