YALI0F21659g

Overview

Description similar to uniprot|Q12436 Saccharomyces cerevisiae YLR130C ZRT2 Low-affinity zinc transporter of the plasma membrane
Locus type CDS
Locus tag YALI0F21659g

Location

Species Yarrowia lipolytica Positions 2863705..2864985
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1281 (nuc.)
Previous locus YALI0F21637g Next locus YALI0F21681g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21659g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21659gYALI0F21659g_mRNA-001YALI0F21659g_CDS-001

Nucleotide sequence

 

>YALI0F21659g
ATGTCTCCCGAAATCACCGATCAATTGGTCAGACTGCTGACCCGAGATGACGATGCAGAC
GCTGCCCCCGTTGTCTGCGACTCTGGCAACGAGTACGATGGTCGAATGGGCGCCCGAATC
TCATCCATCTTTGTCATTCTCATCTGCGGAACGTTTGGAGCTCTCTTCCCTGTTCTTTGT
TCCAAGTACTCGCAAATCAAGGTCCCTCCCGTCTTCTTTTTCTGCGCGAAGTACTTCGGT
TCTGGTGTCATCATTGCTACCTCTCTGCTCCATCTTCTACAACCTGCCAACGAAGCTCTT
TCCCAAGAGTGTCTTGGTCACTGGAATGACTACCCCTATGCCTTTGGTATCTGTCTCTTC
ATGGTCTTCTTCATGTTTGCTGTGGAGCTGGTCTGCTTCAACATGTTTGGACACCAGGGC
CACAGCCACGGACCCGTAGGACTGGCTTCCTCTAAGGACGTGGAGATTTCAGGTGTTCAC
GAGCATACCCACGAGGGTCACTCTCACGACGACCACTCTTCCGATGATATCGTCAAGGAG
AACGAAAAGCCCAGAGAGCACTCTTCCGTTCCTGTCTCTATGCCCAATCCCATTGCTAAC
CATGACCCCCTGACACCCAAAGACCACTACGGACACTGCGAAGAGCATACTGACCCCAAC
GACGTTGATTTGGAGAACGACATGGGTTTGGAGACCTACTCTGCCCAGCTCGTTTCCATT
TTTGTGCTCGAATTTGGTATCATTTTCCACTCTGTCTTCATTGGTCTGACTCTTGCTGTC
TCCGGAGACGAGTTCAAGGACCTGTACATTGTGCTTGTCTTCCACCAGATGTTTGAGGGT
TTCGGTCTGGGAACTCGACTGGCCACTGCCCCTTGGCCCAAGAAAAAGGTGTGGACTCCT
TGGATCCTTGGTCTGGCATTTGGCCTCACCACCCCCATTGCGATTGCCATTGGTCTCGGT
GTGCGAAAGACCTACCCTCCTGGAGGAAAGACAGCCTCTATCACCAACGGTATCTTTGAC
TCCGTGTCTTCCGGTATCCTGCTGTATACCGGTCTCGTTGAGCTCATGGCCCACGAGTTT
TTGTTCTCGTCCGAGTTCAAGCACGCCAACAACTGGCGAATCTTCTGGGCCTTTGCCTGG
ATGTGTGCCGGAGCCGGACTCATGGCCCTGCTGGCCAAGTGGGCTTAATCAAGGGGAGGA
GTATCGTTGATGATGTGTCGTGTAAACGACATTATTTATTGTCGAAAGACGTCCAAAAGT
AATTGATTAATTGTTGTATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21659g_CDS-001

Protein length: 396 aa.
Product: Low-affinity zinc transporter of the plasma membrane, putative

>YALI0F21659g_CDS-001 MSPEITDQLVRLLTRDDDADAAPVVCDSGNEYDGRMGARISSIFVILICGTFGALFPVLC
SKYSQIKVPPVFFFCAKYFGSGVIIATSLLHLLQPANEALSQECLGHWNDYPYAFGICLF
MVFFMFAVELVCFNMFGHQGHSHGPVGLASSKDVEISGVHEHTHEGHSHDDHSSDDIVKE
NEKPREHSSVPVSMPNPIANHDPLTPKDHYGHCEEHTDPNDVDLENDMGLETYSAQLVSI
FVLEFGIIFHSVFIGLTLAVSGDEFKDLYIVLVFHQMFEGFGLGTRLATAPWPKKKVWTP
WILGLAFGLTTPIAIAIGLGVRKTYPPGGKTASITNGIFDSVSSGILLYTGLVELMAHEF
LFSSEFKHANNWRIFWAFAWMCAGAGLMALLAKWA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG