YALI0F21549g

Overview

Description uniprot|Q9UVF1 Yarrowia lipolytica, C3HC zinc finger domain-containing protein
Locus type CDS
Locus tag YALI0F21549g

Location

Species Yarrowia lipolytica Positions 2855000..2856172
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1173 (nuc.)
Previous locus YALI0F21527g Next locus YALI0F21571r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21549g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21549gYALI0F21549g_mRNA-001YALI0F21549g_CDS-001

Nucleotide sequence

 

>YALI0F21549g
ATGCACAACACTTCTACTTATCACCACACCATGCCGACCGAAGAGCAACTCCATGGGATC
ATGGAATCGCTGCGGGAGGTGACAAGAAAGTCCGGCTCCGCTCCGACAACACCCACAAAA
CACTCTCCCCGAAATTCGACGCTCAAAACAGCAACTCCAAACAGATTCACAACAGCATCC
TCGACATCTGGAAAAATATCCAAACGACCGTCTTTAATGGAGCGAATTAGACAGGTCAAG
GAGAAGGATTATCGAAGAACAACAAAGGAAATCACAGAACTAGCTCCTACGACTACAGCA
ACATCAACCCCTGCTACATACACTCCGTGGTCCAAGGAAGACTTTCTTGACCGGGTCTCG
ACATACACTTATCAAAAGTACCCTATTGAGACGTCGCTGTACCCGAAACTGAGTCCCTAT
AATGTGGCTCGTTACGGCTGGAAATGTACAAGTTCAAAAATGCTCCAATGCGTGAGTTGT
GGGAGTTATCTGGCAGTTGTCTGTGGAGAGGAAGATGATGAAGCTACCATCAAGGTTGTG
CAGGATAAGTATCTTGGGCTTATTACACGGAACCATTCCAGTAGATGCTTGTGGAAGAAC
AAGCCTTGTTCTGAGAGCCTGGGATCGATCATGGGCAACATTGGACGGCTTCGAAAGGAT
TTAGGAGGAAAAATTGCAATTCCCGAGGGCGTCGAGGTTACTGTGGATGGACAGAGTGTG
GAGGATTTCTTTAAGAAATTACTTCTTGAAGTTGACGGTGAAGTAAACAAGGAAATCGAC
GAGAATAGGGGACTGGATTTGAAGGAGGAAGTGAAAGAAAATGGATCTGGCTCTAATAAG
GACTCAAACGACCTGACGCAGTCAGCTGAACTTGGATCCGACTCAAAACTCATCCCGGAA
GAAGTGTCTAGAATCACACTCGCTGCTGGATGGAGAGGATCCCACAATATGTTCAAGTGC
CACGTTTGTTCAAGAATAGTCAAACCCTCTGAGACGTTTGATGTGGTGCAGGAACACAGA
GACTGGTGCCCCTACGTTGTGGAAAAAGAGGGTGACAAGCCCGCATGGTGGCAAGTATTG
ACCAAGCCATCCAAGGAGTCTTCTAAGAAGCGTCTCTCCAATATCAGAGAGGTGTATTTC
GGTGTATAGAAACGTATTTATTATTAGACATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21549g_CDS-001

Protein length: 383 aa.
Product: Conserved hypothetical protein

>YALI0F21549g_CDS-001 MHNTSTYHHTMPTEEQLHGIMESLREVTRKSGSAPTTPTKHSPRNSTLKTATPNRFTTAS
STSGKISKRPSLMERIRQVKEKDYRRTTKEITELAPTTTATSTPATYTPWSKEDFLDRVS
TYTYQKYPIETSLYPKLSPYNVARYGWKCTSSKMLQCVSCGSYLAVVCGEEDDEATIKVV
QDKYLGLITRNHSSRCLWKNKPCSESLGSIMGNIGRLRKDLGGKIAIPEGVEVTVDGQSV
EDFFKKLLLEVDGEVNKEIDENRGLDLKEEVKENGSGSNKDSNDLTQSAELGSDSKLIPE
EVSRITLAAGWRGSHNMFKCHVCSRIVKPSETFDVVQEHRDWCPYVVEKEGDKPAWWQVL
TKPSKESSKKRLSNIREVYFGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG