YALI0F21483g

Overview

Description similar to uniprot|P38805 Saccharomyces cerevisiae YHR088W RPF1, Nucleolar protein involved in the assembly and export of the large ribosomal subunit
Locus type CDS
Locus tag YALI0F21483g

Location

Species Yarrowia lipolytica Positions 2850112..2851181
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1070 (nuc.)
Previous locus YALI0F21450g Next locus YALI0F21494g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21483g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21483gYALI0F21483g_mRNA-001YALI0F21483g_CDS-001

Nucleotide sequence

 

>YALI0F21483g
ATGGGAACGGTAAAGCGAGATATTCGGATCGCCAACAAGGAGAAGCGAAAGAAGGTGTTC
GCGGAAATGAAGCACAAGCTCAATAAGGAGCGACACGAGATGCGAAGGGAACGAGCCAAG
GAGGAGGCCAAGAACCCCGAGCTCAAAGAGAAACGTCTGGCTGAGAACGTGCCTGACACC
ATCGAGGCCAAGCGAGTCTATGATGAGACCATCGCTCAGGAGATGGAGGGAGAGGATGAG
TTCAAAGAGTACTTTGAGGAGGGAAAGCCCCCCAAGGTACTGATCACTACCTCTAAGCGA
GCTCGAGGACAGGCCTACGACTTTGCAGACCTTTTGTACGACATTATCCCCGGCTCCGAG
TTCAAAAAGCGAGTGGGAGACTTCACAATGACGCAGATTGCCAAGATGTGCGCCGAGAGA
GACTACACTGATCTGGTGGTGATCAACGAGGACAAAAAGAAGGTGAACGGCCTGACCTTT
ATTCATCTGCCCGAGGGCCCCACCATGTACTTCTCCGTGTCATCTTTGAAGATGCCTAAG
GAGATCAAGGGCCACGGCCGATCAACAACCCACATTCCCGAGCTGATTCTCAACAACTTT
TCCACGCGACTGGGTAAGACTGTCGGACGGCTGTTCCAATCCATGTTTCCTCAGCAACCG
GAGTTTGTGGGACGTCAGGTGGTGACTCTGCATAACCAGCGAGACTGGATCTTCTTCCGA
AGACACAGATACGTGTTCAAGAATGAGGAGCGAGTGGGTCTGCAGGAATTGGGTCCTCAG
TTCACCCTGAGACTCAGACGTCTTCAGAGAGGCATTCGAGGAGAGGTGGAATGGGAGCAT
CGATCGGCCATGGATAAGGATAAGAAGAAGTTCCATTTGTAAGGGAACTGCAAGCACAGC
GAGGATCGAACGCTTTCACAGATCGACAAACACTTTTCGACAGTCATACAGACTTAACAA
GGCTTCAATCTGATTCGGCAACAACTCGCTGGCTTCATTTGCAGGCGCACGCTTGCATTC
TTGTGGTTTAATTGGACTGCAAGGATATAGAAATGTATATTTGGTTAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21483g_CDS-001

Protein length: 294 aa.
Product: Ribosome production factor 1, putative

>YALI0F21483g_CDS-001 MGTVKRDIRIANKEKRKKVFAEMKHKLNKERHEMRRERAKEEAKNPELKEKRLAENVPDT
IEAKRVYDETIAQEMEGEDEFKEYFEEGKPPKVLITTSKRARGQAYDFADLLYDIIPGSE
FKKRVGDFTMTQIAKMCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTMYFSVSSLKMPK
EIKGHGRSTTHIPELILNNFSTRLGKTVGRLFQSMFPQQPEFVGRQVVTLHNQRDWIFFR
RHRYVFKNEERVGLQELGPQFTLRLRRLQRGIRGEVEWEHRSAMDKDKKKFHL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG