YALI0F21153g

Overview

Description highly similar to uniprot|P38912 Saccharomyces cerevisiae YMR260c TIF11 translation initiation factor eIF1a
Locus type CDS
Locus tag YALI0F21153g

Location

Species Yarrowia lipolytica Positions 2808028..2808709
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 682 (nuc.)
Previous locus YALI0F21131g Next locus YALI0F21175g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21153g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21153gYALI0F21153g_mRNA-001YALI0F21153g_CDS-001

Nucleotide sequence

 

>YALI0F21153g
ATGCCTAAGAACAAGGGAAAGGTGAGTAGCTGACGGTGGTTTGCGGCACGAGAATCGAGG
CTAGGCGGTATTTTGCACATGTGGAAATGCCAACGGAATAATCTGAAATGCCCACCTTAC
TAACTCTAGGGCGGAAAGAACCGACGAAGAGGAAAGAACGAGTCTGAGGGTAGCAAGCGA
GAGCTTGTCTACAAGGAGGAAGGCCAGGAGTACGCCCAGGTTGTCAAGATGCTCGGAAAC
GGTCGTCTTGAGGCCCAGTGCTTCGACGGTGTCAAGCGATTGGCTCACATTCGAGGAAAG
CTCCGAAAGAAGGTGTGGATCAACCAGGCCGATATCATTCTGCTTTCTCTGCGAGACTTC
GAGGACGACAAGGCTGATGTCATCATGAAGTACCACCCCGATGAGGCTCGAGCTCTCAAG
GCTCAGGGTGAGCTTCCTGAGTCTGCCAAGATCAACGATGCTGACCAGGGTGGAGAGGAC
GACGAGTGCAACTTCGAGTTCGACAACGACGATGATGATGATGATGAGGAGGATGAGCTT
GATATCGATGATATCTAAGCTACCTAGAAGACCGTCCAAAAGTCCAAAAGAAACTGCCCA
CGACAGGTGGCTGTACACTAGTACATGTTGTTTTGTCGTTTAGGCGAGGTATAGATTAAC
AGATCATTTTATTGTGAATATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21153g_CDS-001

Protein length: 150 aa.
Product: Translation initiation factor eIF1a, putative

>YALI0F21153g_CDS-001 MPKNKGKGGKNRRRGKNESEGSKRELVYKEEGQEYAQVVKMLGNGRLEAQCFDGVKRLAH
IRGKLRKKVWINQADIILLSLRDFEDDKADVIMKYHPDEARALKAQGELPESAKINDADQ
GGEDDECNFEFDNDDDDDDEEDELDIDDI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG