YALI0F21131g

Overview

Description similar to uniprot|P38324 Saccharomyces cerevisiae YBR228w SLX1 Endonuclease involved in DNA recombination and repair
Locus type CDS
Locus tag YALI0F21131g

Location

Species Yarrowia lipolytica Positions 2806622..2807543
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 922 (nuc.)
Previous locus YALI0F21109g Next locus YALI0F21153g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21131g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21131gYALI0F21131g_mRNA-001YALI0F21131g_CDS-001

Nucleotide sequence

 

>YALI0F21131g
ATGACGCACCAATACCCTCCATTCTACGGAGTGTATTTGCTGCAGTCTACAAAGAAACCT
CTCTCCTGCTACGTGGGCTCTACTCCGAATCCGTTCCGACGTATTCGGCAGCACAACGGA
GACCTTAAGGCCGGAGGAGCATGGCGAACCAAAAGAGCACACTTAAGACCTTGGAGTATG
GTGCTGATTGTCAACGGATTCCCTTCCAAGATTTCTGCTCTCAAATTCGAGCATGCCCTG
CAACATCCTAACATGACTCGTCTCATTACCACTAAAGACATCAAGCGAAAAGTGCCTCAG
AAAGCCAGAGCTTTGGGAACGCATCTAGCCTTCATCCGTCTGCTAGTGAGATGCTCCTAC
TTTCGCAGAATGCATTTGAGAATCACATTCTTCCGCTCACATGCGCATGAAGCGTGGGAA
AAGAACGATTACGATGTTGGCAGTCTGCCACCTCAGTTTCAGGTCGAGACAGACTACCCC
TCGGACGAAGCCGAAGCCCCACCATCGACAGTGGGAAGCGGGGAACTCGACATCAACAAT
AGAAGCATAGAAGAATATCTACAAAAGTGCAGAGATGCTGTTTCAAATGACAAACAACTC
ACTTGCTATTTATCGGAGAAGACACTGAACATCTCAGAAGGCAATGTTGCTCTCTGTCAC
AACTGTGATGGGGCCTTTGACGTGGCAGAATTAGCCGAGCGCTTTCTGAATGAGGAGATA
CCTGAAGAATTGCCCTTCACCACACCTTCCCGACACATCATCCCGATTGGTGGCGATTGT
CCCTCGTGTTTGGCACGGATGGAATGGTCTAACGTGATAAAAGGGGTCTTAGCTATGAGA
CCCGTACTAGAGGACAATAAGGAGTGATGTTACTACAAGTAGCACAACCAAGTAATTTAT
AAATCGATTTCGAATTTTCAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21131g_CDS-001

Protein length: 289 aa.
Product: Endonuclease involved in DNA recombination and repair, putative

>YALI0F21131g_CDS-001 MTHQYPPFYGVYLLQSTKKPLSCYVGSTPNPFRRIRQHNGDLKAGGAWRTKRAHLRPWSM
VLIVNGFPSKISALKFEHALQHPNMTRLITTKDIKRKVPQKARALGTHLAFIRLLVRCSY
FRRMHLRITFFRSHAHEAWEKNDYDVGSLPPQFQVETDYPSDEAEAPPSTVGSGELDINN
RSIEEYLQKCRDAVSNDKQLTCYLSEKTLNISEGNVALCHNCDGAFDVAELAERFLNEEI
PEELPFTTPSRHIIPIGGDCPSCLARMEWSNVIKGVLAMRPVLEDNKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG