YALI0F21109g

Overview

Description weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 High affinity nicotinic acid plasma membrane permease
Locus type CDS
Locus tag YALI0F21109g

Location

Species Yarrowia lipolytica Positions 2804958..2806544
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1587 (nuc.)
Previous locus YALI0F21087g Next locus YALI0F21131g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21109g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21109gYALI0F21109g_mRNA-001YALI0F21109g_CDS-001

Nucleotide sequence

 

>YALI0F21109g
ATGGACGAAACTAAGGAACTCTCCATTGAACACAAGGAGCTGGCTGAGATTGCCTCCATT
ACATCTCCTAAAAACATTGGACTCCCCACTGCCGAGGAAAAGTTTCCGAACATCAACAGA
AAGAAGCTGCTGCGAAAGATGGACTGGCACCTCATGCCCATGCTCACAATGCTTTATCTC
ATGTCATTTCTGGACCGAGGAAACATTGGAAATGCACGAATTGAGGGTATTGTTGAGGAT
CTGGGACTCTCAGGTACCCAGTTCAATTGGTCCATCACCGTCTTCTTCTTCACATACTGT
GTGTTTGAAGTGCCCTCCAATATGCTTCTCAAGCGATTCCGTCCATCCATCTACCTTCCC
ACCATCATGGTTGCCTGGGGCATTGTTATGACTCTTATGGGCATTGTCAAAAACTACGGT
GGTCTTCTGGCTTGCCGACTCATTTTGGGAGCTACTGAAGCTGGTCTTTTCCCTGGTGTC
GCTTACTATCTGACCATGTGGTACTGCCGAGCTGACATGCAGTACCGACAGGCCATGTTC
TTCTCTGCTGCAGGATCAGCTGGAGCCTTCTCTGGTATCCTTGCCTTTGGAATCGGAAAG
ATGAGAGGAAAGGCTGACCTCAACGGATGGCAGTGGATCTTCATTCTCGAAGGTATCGCA
ACCGTTGTCGTTGCTATCATTGCGTACTTTTGTCTCTATGACTTCCCTGAGACTGCCAAG
TTCCTGACCGAGGAAGAGCGAGAGTACATCCAGTATGCTCTCGAGTATGATGGCTACGAT
CGAGACCTCGCTCTCAAGGGTGGAGCTCAAAACTCTGACGCTGTTGGACGAGACAACTCC
AACAACTCCAAGTTCCTCAAGGCTGCCTTCATGGACCCGCAGTCTTGGATTGGTGCGCTT
CTTATGATTCTCATTGTTTCTCCTCTCTACTCCATGTCTTTCTTCAGTCCTATCATTGTC
AGGAGTATGGGTCATTCCGCCAGTATTTCGCAGATTCTGTCTGCCCCATTTGGAGCCATT
GGAGCCATCACCACTGTCATTCAGGCTTACTTTTCAGACAAGTACAAGAGGCGGTTCCCA
TTTCTCATGGTTAACTTCTCGCTTGGCATCATTGGATACGCCCTTTGCATCAAATATGGT
GTCAATAAACAATGGATCACATACGCAGGTTGTATGATTGTCAACATGGGTCTACAGCCT
TCATTCATCTGTCACATTTCCTGGATGTCTGTTAATATTGCTGGCCCTTACAAGAGAGCT
ATTGCCATGGCTATTGTTATCGGTTTCGGAAACATGGGAGGAGCTATTGCTTCCAATATG
TACCGAGCTTCCGACGCCCCTCACTTCAAACAGGGTCATACCATTGCCATCTCCTTTGTT
GCCGCCGCCATGGCGGTCACCATCTGTCTGTATCTTGCCTACAACTTCATCAACAAGCGA
AAGGCCAAGCGATTGTTGGAGGGCCACTATGACCAGTACACCTCCGAGGAGCTATCTGCC
ATGGGTGACCGATCTCCTTACTTCATCTACCGAATGTGATTCGGACATAATCAAGTGTAT
AATAATATCGACTATAATTTTGACCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21109g_CDS-001

Protein length: 513 aa.
Product: Conserved hypothetical protein

>YALI0F21109g_CDS-001 MDETKELSIEHKELAEIASITSPKNIGLPTAEEKFPNINRKKLLRKMDWHLMPMLTMLYL
MSFLDRGNIGNARIEGIVEDLGLSGTQFNWSITVFFFTYCVFEVPSNMLLKRFRPSIYLP
TIMVAWGIVMTLMGIVKNYGGLLACRLILGATEAGLFPGVAYYLTMWYCRADMQYRQAMF
FSAAGSAGAFSGILAFGIGKMRGKADLNGWQWIFILEGIATVVVAIIAYFCLYDFPETAK
FLTEEEREYIQYALEYDGYDRDLALKGGAQNSDAVGRDNSNNSKFLKAAFMDPQSWIGAL
LMILIVSPLYSMSFFSPIIVRSMGHSASISQILSAPFGAIGAITTVIQAYFSDKYKRRFP
FLMVNFSLGIIGYALCIKYGVNKQWITYAGCMIVNMGLQPSFICHISWMSVNIAGPYKRA
IAMAIVIGFGNMGGAIASNMYRASDAPHFKQGHTIAISFVAAAMAVTICLYLAYNFINKR
KAKRLLEGHYDQYTSEELSAMGDRSPYFIYRM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG