YALI0F20988g

Overview

Description similar to uniprot|P25375 Saccharomyces cerevisiae YCL057W PRD1 Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria, Saccharolysin
Locus type CDS
Locus tag YALI0F20988g

Location

Species Yarrowia lipolytica Positions 2790731..2793090
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2360 (nuc.)
Previous locus YALI0F20966g Next locus YALI0F21010g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20988g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20988gYALI0F20988g_mRNA-001YALI0F20988g_CDS-001

Nucleotide sequence

 

>YALI0F20988g
ATGCTAAGACACGGCACTCGCGTGAATCTTATCTTGCGACACTCCCCGCATTTGCCACCT
CGAACCGCACCAACTCTACACAGGTATATAACCACTAGAGTGTCCGTTCAAGCCCCCGCA
AAGGTCAATTGTACTCGTCCCACCACCACCACCACGTCGCGAGTCCCCAAGTTTGCTTCC
CGAACTCTTGCAACTACCAGCACTCCTCCTGACCTCGCCTCTGTCATCGCCGCCGTGAAA
ATGTCCACACCTCCCCAGCAGCCCCCCAACTGGAAGTACACTCCCGAGGAGGTTAAGAAA
TCCGCCAATGACATGGCTGCTTCTTTCAAGAAGCTGGATGACCAGATTGGAGCCATCCCC
ATCGAGGAGGCCACCTATGAGAACACAATTGTGCCCCAGCTGGAGCTCGAAAACACCACA
GCTCTGCCCCGAAACCAGCTGACCTTCTTCCAGCATGTTTCTGCCGACAAGGAACTCCGA
GAGGCCTCTGCCGAGGCTGAGAAGATTCTCATGGACGCCTCTGTCGAGTCCACTATGCGA
CACGACGTCTTCCAGCGAGTTGAGGCTGTCCACAAGCAGCTTGACGAGCTCAAGAAGACC
CTCGACCCCGAGTACATCCGAGCTATTGAGAAGATGTACAAGGGCTATGTGCGATCCGGT
CTGGGTCTGCCCGAAGAGACCCGAAAGGAGGTCGAGGCTCTCAACAAGCGAAAGGGAGAG
CTTGCCATCAAGTTCTCCAACAACCTGTCTAACGACACGTCCTTCCTAGCATTCACTGCT
GAGGAGCTTGAGGGAGTCCCCAAGGACGTTACCGACGGCTTTGAGAAGACCGAGGACGGC
AAGCTGAAGATGACTTTCCAGTACCCCGATTTGTTTCCCGTGCTGCGATCCGCTAAGAAC
CCTGAAGTCCGAAAGAAAGCCTTCCTTGGCGACCAGAACCGAGTCAAGGACCTCAACACT
CCTCTTCTCAAGGAGACCGTCGAAATCCGAACCAAACTAGCAAACCTGCTCGGGTACCGA
CACCACTGTGACTATGTGCTTGAGGACCGAATGGCCAAGAAGTACGAGAACGTCATGCCT
TTCCTGGAGGACCTCAAGGAGCGAATCAAGCCCCAGGGAGAGAAGGACATTGCTGAGCTG
CTGCCTATCAAGAAGGCTGACTACGAAGCCCAGGGCAAGTCTGCCGACTACAAGGACGTC
CTTTATGTGTGGGAGACCCGATACTACCTCAACAAGCTTCTGGAGGACCAATTCAAGATC
GACCAGGAGAAGATTGCCGAATACTTCCCTCTGCAGAATGTTCTCGACAAATCTCTGGCC
TTCTTTGAGAACCTATTCTCTCTCAAGTTCGTCGAGACACCCAAGGACCAGGCCTCCACC
TGGCATGAGGATGTCAAGCAGTACGCTGTGTGGAAGTACGACACTGCTGAGCCTGTCTTC
GTCGGATGGTTCTATCTTGATCTGCACCCTCGACCCAACAAGTACGGCCATGCTGCCAAT
TTTGGCATTGGTCCCGGTTTCACCGACCTGAAGGATGGTTCTCGAACCTATCCCGCCACC
TCTCTGGTCTGCAACTTCACCAAACCCACCGCTGAGAAGCCCTCTCTTCTCAAGCACTCC
GAGGTGACTACCTTCTTCCACGAGCTTGGCCACGGTATCCACGATCTCATGGGCACCACC
AAACTGTCTCGATTCCACGGTACCTCAGTCTCATGGGACTTTGTCGAGTGTCCTTCTCAG
ATGCTCGAGTTCTGGACCTGGGAGCCTGAGCAGATCAAGCACTTTTCCGCTCACTACAAG
GACGGCTCCAAGATGTCTGACGAGACAATCAAATCTCTGGTTGCCACCAAGCACGTCTGT
GACGGCCTGCACTACCTGCGACAGGTCCATTTTGCCATGTTCGACTTTGGTCTTCACAAC
AAGGGTATCAAGGATACTCCTGCCGATCTGGACAAGACCTGGAACGACATGCGAGAGGAA
ATTGCTCTGGTCAAGAACGATGGTGAGTCCATGGCAGGCTACTCTACTTTCGGCCATATT
ATGGGCGGTTATGACTCTGGTTACTACGGTTACCTGTGGTCTGAAGTCTTTGCTGCCGAC
ATCTACTACACTCGGTTCAAGGACGACCCCATGAGCACCAAGAGTGGTCTTGACTACAGA
AAGGCTATTCTTGACCGAGGTGGATCTCGGGACGAGATTGAGGGTCTCAAGGAGGTTCTT
GGACGAGAGCCCAACAATGATGCTTTCCTCAAGGAGCTCGGTATTGCCGCCTAAACAAAT
TATATATAATAATGTCATGTCACGATCTGAACCAATATCTGCATTCCATGCTATAATCAA
TTGTATTTACACTATCTAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20988g_CDS-001

Protein length: 758 aa.
Product: Zinc metalloendopeptidase, putative

>YALI0F20988g_CDS-001 MLRHGTRVNLILRHSPHLPPRTAPTLHRYITTRVSVQAPAKVNCTRPTTTTTSRVPKFAS
RTLATTSTPPDLASVIAAVKMSTPPQQPPNWKYTPEEVKKSANDMAASFKKLDDQIGAIP
IEEATYENTIVPQLELENTTALPRNQLTFFQHVSADKELREASAEAEKILMDASVESTMR
HDVFQRVEAVHKQLDELKKTLDPEYIRAIEKMYKGYVRSGLGLPEETRKEVEALNKRKGE
LAIKFSNNLSNDTSFLAFTAEELEGVPKDVTDGFEKTEDGKLKMTFQYPDLFPVLRSAKN
PEVRKKAFLGDQNRVKDLNTPLLKETVEIRTKLANLLGYRHHCDYVLEDRMAKKYENVMP
FLEDLKERIKPQGEKDIAELLPIKKADYEAQGKSADYKDVLYVWETRYYLNKLLEDQFKI
DQEKIAEYFPLQNVLDKSLAFFENLFSLKFVETPKDQASTWHEDVKQYAVWKYDTAEPVF
VGWFYLDLHPRPNKYGHAANFGIGPGFTDLKDGSRTYPATSLVCNFTKPTAEKPSLLKHS
EVTTFFHELGHGIHDLMGTTKLSRFHGTSVSWDFVECPSQMLEFWTWEPEQIKHFSAHYK
DGSKMSDETIKSLVATKHVCDGLHYLRQVHFAMFDFGLHNKGIKDTPADLDKTWNDMREE
IALVKNDGESMAGYSTFGHIMGGYDSGYYGYLWSEVFAADIYYTRFKDDPMSTKSGLDYR
KAILDRGGSRDEIEGLKEVLGREPNNDAFLKELGIAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG