YALI0F20614g

Overview

Description some similarities with uniprot|E0VVP8 Pediculus humanus conserved hypothetical protein
Locus type CDS
Locus tag YALI0F20614g

Location

Species Yarrowia lipolytica Positions 2743137..2745434
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2298 (nuc.)
Previous locus YALI0F20592g Next locus YALI0F20636g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20614g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20614gYALI0F20614g_mRNA-001YALI0F20614g_CDS-001

Nucleotide sequence

 

>YALI0F20614g
ATGGACATCAAAAAGTCGTTTCGTAAGATGGCTCTGGTCTGGCACCCCGACAAAAATCCA
CATCGCAAAGACGAAGCCACCAAGAAGTTCCAGGACATCAATGATGCCTACAACGTTTTG
AATGATGCCAAAACCCGTCGAGAAGCTGAGGCCAAATGGAGAACCGCTTCCAAAGCCTCG
TCTACTGCCTACTACTCCTATGGAAGTACGCCTACTAGCAGTTCCAGAGGAGGAGGATGG
ACGTCTTCACAGCATCATTGGGACGACTCGTTCTCCGACTTTGGCGGGGCCAGCGGTTGG
GCCTACTCTGGCTTTTATGGAGCCTATGGACGCCCGCAGCAGCAGCAGCAGCAAAGCAGA
TCTTCTAAATCGTCCAGATCAAAGAGCAGTGCCTATAACTACTACGCCCAGAGAGACAAC
AGCAACAGGTACGCTTATGACAGCACTCCCAGCGGAAGCGGCAGCAACAAATTTAAGACC
AAGACCAAACCTCGACCCAAGACTGAAACGAAACCCAAGCCCGAACCGCGAGCTGAAACG
AAGCCCAGGCCCACACCTAAGCAGGAAACCAAGCCGAAACCGTCACAGTTTGAAGAGGCT
TATTCGACACCTCCGCAGTTCAAATCGACAGCTGGCGACCCAAGCTTCACACGAAAGACA
GGCTACAGTTACACATCTGGGGAACGATATAGACCCGGAGATACCCCCAATGTTAAGCCG
CCTGTTTACGAACAGCAGCAGCAGCAGCAGCAGGAGAAGGATACGACTGGAACTGAAGCA
CCGTTCAACTTTGAGCGACAACGAGCACCTCATAGCAGTTCTGGGAAGGGAGAGAAGTTC
AAGATGTACGACGAGCCCCCGCCTAAGAACAAACCGACTTCAGGCTCTTTCAACTTCACC
ATGCCTGATATGAAGACCAGTGAGCCTTCTCCTGCGAGCAAATCGTTCCGAGAAGACCAT
AGCTTTTTGTTTGGACAGGATCAGGAAGAAGAGTCTGAAGAAGAAAGTGATTTCTCTGAG
AATGACCTTCCTGATCCCAACTACAAGCAGACTCGTAACCCGTTTGGATTCAATAGCACG
TTTGTTGATTTGACCGGAACGGACGACGAAGTGGAAGAGCTGTCTCCTGACGAGTACCGT
GAGATTGCTAGAGAAGCACAGCGACGTAAGGATCAGGAGAGACGTGAAGAACTCATCAAT
GAGAGCAAGGCAAAGTCTCAGAGAGCCCGAGACATGTTCGGGGAGGAAACCAGCAGTAGT
GATGATCTGGATGCCCATGCTCAGGATGTCTCTTCATCGTCTGATTCTGATATTGATACC
AGTATGTTTGAAGGTAATGATCAGCATGAAGCTGCTCAGGGCAACATATTTGGAGCCAGT
CTGTTCGACTCTACACCATTTGAAAAGGACGTGCTGAGTTCCATGTTCAACTTCAATCTT
GGTAGTGACAGTCCTCAAGCTAAACCTCGGCGAAGGCCTGTGGCTGCTCATCGACGTCGA
AAACCTCCGACCTCTCGAACTTATACCAGAAGCAGACAGCCGTACATGGAGGAGACTTCT
GATTCCGATCATGCCTCCAGAACGCCCTTCACTCCTCGAAACGCAGAAGAAGCTCCTCCG
TCGAAGAAGGTGAGCCCAGATTTCAAACAAAATCCCCTGTTTGATATCAACAACATCCAC
CCGTTTAACGAGACCAACGGCAACTTTGGTATGGACGAAATCCGAAACAACATTGATCAG
ATGGGTGGGGACAAGGTGAAAACTGAGAAGGGGGGACCTATTGGGGAAGACAACAACAGC
ACTGGTCGGTTCAGACGGTCTAAAAACACAACCAGTGAGCCCGTCAACACCAACACCTCG
TCAGCCTTCAGACCCCAGGGTGCCTCGCCTTACACAAAGCTCAATATTGATCTTGCTACC
GACAACGCTCAATTCATTGATCCCCCCCTGCCTCCCAGTTTCAGCTACAATTCAGGAGAA
GATGCAGATACCGCATTGGCTCGGTATCTCAGGGAGTTCAACCAGTACCAGAAAAACATG
GATAAGTTCTACTTGCAATGCATCGAGTATCGAAAGGCACGAATGGAGGCCAATGAGGCT
CACAAGAACATCCTCAATTCTACGTCCACCTACAGAAAGGCTAATATGGAGGCTCGTGAA
ATCGACGCGTTGGTGTTGGAAAAGGAGTACTCGGCCACCAGAAAGCATGCCGAGGCTCTG
GAGCATTACGATGCCATTAGCAACGAGCTGAGATGAAAGTAGAAATATTTATTATAATAC
AATTGCACGATACATACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20614g_CDS-001

Protein length: 752 aa.
Product: Conserved hypothetical protein

>YALI0F20614g_CDS-001 MDIKKSFRKMALVWHPDKNPHRKDEATKKFQDINDAYNVLNDAKTRREAEAKWRTASKAS
STAYYSYGSTPTSSSRGGGWTSSQHHWDDSFSDFGGASGWAYSGFYGAYGRPQQQQQQSR
SSKSSRSKSSAYNYYAQRDNSNRYAYDSTPSGSGSNKFKTKTKPRPKTETKPKPEPRAET
KPRPTPKQETKPKPSQFEEAYSTPPQFKSTAGDPSFTRKTGYSYTSGERYRPGDTPNVKP
PVYEQQQQQQQEKDTTGTEAPFNFERQRAPHSSSGKGEKFKMYDEPPPKNKPTSGSFNFT
MPDMKTSEPSPASKSFREDHSFLFGQDQEEESEEESDFSENDLPDPNYKQTRNPFGFNST
FVDLTGTDDEVEELSPDEYREIAREAQRRKDQERREELINESKAKSQRARDMFGEETSSS
DDLDAHAQDVSSSSDSDIDTSMFEGNDQHEAAQGNIFGASLFDSTPFEKDVLSSMFNFNL
GSDSPQAKPRRRPVAAHRRRKPPTSRTYTRSRQPYMEETSDSDHASRTPFTPRNAEEAPP
SKKVSPDFKQNPLFDINNIHPFNETNGNFGMDEIRNNIDQMGGDKVKTEKGGPIGEDNNS
TGRFRRSKNTTSEPVNTNTSSAFRPQGASPYTKLNIDLATDNAQFIDPPLPPSFSYNSGE
DADTALARYLREFNQYQKNMDKFYLQCIEYRKARMEANEAHKNILNSTSTYRKANMEARE
IDALVLEKEYSATRKHAEALEHYDAISNELR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG