YALI0F19976g

Overview

Description similar to uniprot|Q00776 Saccharomyces cerevisiae YPL259c APM1 AP-1 complex subunit, mu1 subunit
Locus type CDS
Locus tag YALI0F19976g

Location

Species Yarrowia lipolytica Positions 2665352..2666974
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1623 (nuc.)
Previous locus YALI0F19934r Next locus YALI0F19998g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19976g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19976gYALI0F19976g_mRNA-001YALI0F19976g_CDS-001

Nucleotide sequence

 

>YALI0F19976g
ATGATCTCGGCCTTGTTCATCTTGGATCCGTCATTCAAGCCGCTTCTGAGCCGAAACTAC
CGGGGAGACGTGCCTCTCAGTTGTATTTCTGATCTTCCTGGGCTCATTCAGATCGCTCAA
CAGAATGGCAATGTGGCCCCTCCTGTTCTCGAAGACAGAGGTATCCACTACATGTGGATG
GAAAGTGGCTCAGTTATCTTCGTGGCCGTGAGTCCCCAGGTGAGCTGCAACTCTATGGAG
ACTCTGGTCTTTCTATCGCAATTAGCCACCGTTCTGACCTCATATTTCGAACAATTGCAT
GCCGAATCGGTCCAGGACAACTTTGTGCTCATCTACGAGCTGCTCGACGAAATGATGGAC
TTTGGAGTGCCCCAGATCACAGACGCGGGCATTCTCAAGGAGTACATCACTGTGGACGCT
CACAAAAGCTTACTGGGAGCCGTGGGAGATCTGGTCAATGCCGCTGTGGGCGAGGAAGGA
GCAGCCGGAAATTCGGGAGACATCGACGTGGCAACACACACAACCAGTAGAATCTCGTGG
CGACCGACCGGTCTGCAGTATAAGAAAAACGAACTGTTTTTGGACGTTGTTGAAAGCGTC
AATCTGCTCTATGCTAACGACAAAGTGGTTCGACACGAGATTCAGGGCCGAATCAACGTC
ACCTCCTATTTATCCGGAATGCCTGAGCTACGTCTGGGACTCAATGAAAAGGCCATGCTG
GAACACAAGTTGGCTGCCACTGGAGCCACTACACATAAAAAGCCGCGCTCAAAAACTGTG
GAGATGGAAGACGTGCGGTTCCACCAGTGCGTCGAATTGTCCAAGTTTAACGTCGACCGC
CAGATTTCCTTTATTCCTCCAGACGGCAAGTTCGAGCTCATGAGCTACCGACTCAACCTG
GCCAACGCGGAAGAAGATCATGCTGAAGAAGAGGAGGGCCAAAAGGTGCGAAACTACGCT
GCCAGAAACCGGCCACTGATTCTGGTAACCACAGATGTTGAGAAGAAGGGAAACACGCGT
CTTCTGATTTCTGTTAAGCTCAAGTCGCAGTTCAGAAAACGTTCAACAGCCAACGATGTA
GAAGTGTTTGTTCCTGTGCCTCCAGATGCCACTTCACCACGTTTCAGAGCCACTGCCGGA
ACCGTGGTCTACATGCCCGAGCGTAACGCCATCCGATGGAAGATCAAACAGCTCCAGGGA
GGAGGAAAGGAGTTTTCCATGAAGGCCGAGATCTCTGTTTCGCGCACGGAGGAGCAGGGA
GAGTCTTTGTCAGAGTTGCTGCATCTTAATAACACTCCACAGAGCCAGATCCCCGTCCAG
GTTACCTTCGAGATTCCTTACTATGCCATGTCAGGCCTGCAAGTGCGATATCTCAAGGTC
AACGAGCCTACTCTCAAGTACAGGTCGTTGCCATGGGTTAGGTACATCACCAAGAACGGA
GATGACTACAGTTACCGACTGAAGAAACCTCGAGAGAAGGAGTCCAAGAAGAAGGACAAG
ACCAAGGCTGAGCCAGCCGCTGGGGATGCCAATACGAGTACATAGAGATTCAAGAGCTTA
GTTGTTGGGTTGTTGGAAGGACGAATAATGAATTGATAGATCAATGATATTTTTTTAATT
GTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19976g_CDS-001

Protein length: 515 aa.
Product: Mu1-like medium subunit of the AP-1 complex, putative

>YALI0F19976g_CDS-001 MISALFILDPSFKPLLSRNYRGDVPLSCISDLPGLIQIAQQNGNVAPPVLEDRGIHYMWM
ESGSVIFVAVSPQVSCNSMETLVFLSQLATVLTSYFEQLHAESVQDNFVLIYELLDEMMD
FGVPQITDAGILKEYITVDAHKSLLGAVGDLVNAAVGEEGAAGNSGDIDVATHTTSRISW
RPTGLQYKKNELFLDVVESVNLLYANDKVVRHEIQGRINVTSYLSGMPELRLGLNEKAML
EHKLAATGATTHKKPRSKTVEMEDVRFHQCVELSKFNVDRQISFIPPDGKFELMSYRLNL
ANAEEDHAEEEEGQKVRNYAARNRPLILVTTDVEKKGNTRLLISVKLKSQFRKRSTANDV
EVFVPVPPDATSPRFRATAGTVVYMPERNAIRWKIKQLQGGGKEFSMKAEISVSRTEEQG
ESLSELLHLNNTPQSQIPVQVTFEIPYYAMSGLQVRYLKVNEPTLKYRSLPWVRYITKNG
DDYSYRLKKPREKESKKKDKTKAEPAAGDANTST*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG