YALI0F19888g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F19888g

Location

Species Yarrowia lipolytica Positions 2657670..2659994
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2325 (nuc.)
Previous locus YALI0F19866g Next locus YALI0F19910g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19888g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19888gYALI0F19888g_mRNA-001YALI0F19888g_CDS-001

Nucleotide sequence

 

>YALI0F19888g
ATGTCGACAGCCCAACTGTCGCCGTTAGAGCAGTTGCTGGCGCTGCTGCCAAAACTGTTT
GAGGGAAACGGAAACCTCGCCACAGTCACGTCGCTGCTACCTTCAGGTCTACTAGAAACA
GTGCTCAACTCGCCCTATGGCCCCGCTCTCGTCGATATTCTCAACTCACAGACAGGCAAC
CGGCCACTCGAGTACTCAGATAGATTGCTCTCGATCATGCCGATCCCACGATGGGCATGG
ACAGGAACCGGAGTCGCCAAGGTGGTCAAAATGGCCCACCAAGTTGTGGGAAATGAACTT
CCCGTCAATGTCGTCAACCTCGTCATGACCACGCAATACAATATTTACGGTAACTTCCCC
ACCAAAAGCGATATTGCACCCTCAGCCATTTTCGTGGCAGTCAACGGCATCCTCATGTGC
GCCCACTTTTATGTGTTTGCCCGAGGTTACATGCGAAACCACCACTTCTGGCCCTCCTTC
GGCCTAGGATGGCACTGCATTCTCAACATGCTGGGTTTTGGCATGCGAATCGGCTGGGCC
AAAAATGTGCTTGACATTAAGCTCGGTATCGCGTCCACGGTCATGATTGTTGTTTCTATT
GTCTACGTCAACGCTATGAACCTGCTGCTAGCACACCGAATTCTCACATTTAGACATCCT
GAAACGGGTGATGCCACGTGGTTCGGTTGGGCCATGATTGGCGTCTACCTTGTCATTATC
GGAGTCATTGTTATGGCCGTCATTTCGCAAGTTGTTATCTTCCTCTACTTTTTGAACTAC
CAAAACTGGAGACAGGCCACAGGAGCCATGCAAGCATCTTCCGTGTTTGCAACACTGGTC
GCCATAGGAGGAGTATTTCTCATTGGTCTGGCATACGTTCTTCCCCGAGGAGCCCTTTCT
CTCCATAACGACGACCGACGGCGTCTCCCAGCTTCAAACATTGAGTCTTACGGCATGTTC
TACTTCCCTCCCAAGTACTCGCAGGTGCTGCAGTATGAGGCAGATCCCAGTGCCAAAATT
GATTCTGGCAAGCTGGCTGCTCGTGTGTTGAACGGACGAGATCTTGGCTCCTCTGCCGCC
ATCATTATTATCACTTCTCTGATTCTTACCACCACAGCTGCCATGCGATGTGCTACCTGT
TTCCTGGGTGAGCGATGGTCACTCAACGTGGCACCCATCTACAGTAACACTCTATTCTAC
ATTGGTTTCGGACTGTTTGAGACTATTGCCAACGTCATCTTCCTCGTGGTTCGAATCGAT
CTGCGATTCTACATTCCCGACTGGCCTATCAAGGGCACTGGTCCTCTGACCATCAAACCC
GGCACTATGGAGATTATGACCGATCCGTACCGACAGGGTCCTCCTGGTATGGGTCCCGAT
GAGAAACACTTCGAGAAGGCTCATTTCGAGGAGGTCCAACCTCCAATGCCTCCCATGCCC
ACCTATGGAGCAAGCTACGGACCCATTTCGTACGCTGGTCTGTCCCCAGAGGTGCTGGCA
GCTGCTAACGCCATGAATACCACACCTGGAGCTATTCAGCAAACCGAGGAGGAAGCTGAG
CGAGCTGCTGAGAAGGCCGCTAACCCCCACACTCCCTTCTCCGAGGCTACCAAGCTGCCT
ACGGACTCTGAGTTTGTGGATCCCATCCCTCCAATGCCCGAAAAGAAGCTGAAGCATTCT
CCCGAGCTCAGAGAGGCTACTCTTCCTCAGCTTGTGAATCTGGGAAGTGCGCCTGGAACC
CCCAACGCTGCGGCTGCCACCTTTGGAGAGATCCCCCACGCCACTCCGATGTCCATGCCC
ACAGTGTCGCAGACTCCCATGCCCACCTTACCTACCATTACCACAGCCCACGAGCCCAGT
TTCGCACAGCTCCAACGAGAGCGACTGGACGCCACTCCTTCTCTGCCCGAGATTTCTTTC
CCCCCTACCCCTTACCAGATTCGAGCTGTTACCCCAGCAGCGTTCCCCACACCCATCATT
TCTCCTGCCACTCCCCAGCAGTTCCCCGAGGCTCACTTTTCTCGAGTCACGACGCCCATG
GAGCGTGGTTTCACGCCTGTTACACGTGGATTCACTCCTAAGCAGGATCTCAATGAGCCT
ACTTACGGCGTGCCCTACGCTGAGCGGGTGAGCATCCCCTCACCGGTGCACGATTACGAT
CCTCATTACAGCAAGCCTTATGAGGAGCCTAAGGACGAGTTCCGAAACAGCGGGGGCAGT
GAGGAGGTTTAGGCAATGAGGGAGACTCACTAAAACATATTTATTGGATCATGATCCACT
ACTTGTAGCTTTCTTGTATTTTAATTTTATGACTTTTGTTTATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19888g_CDS-001

Protein length: 744 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F19888g_CDS-001 MSTAQLSPLEQLLALLPKLFEGNGNLATVTSLLPSGLLETVLNSPYGPALVDILNSQTGN
RPLEYSDRLLSIMPIPRWAWTGTGVAKVVKMAHQVVGNELPVNVVNLVMTTQYNIYGNFP
TKSDIAPSAIFVAVNGILMCAHFYVFARGYMRNHHFWPSFGLGWHCILNMLGFGMRIGWA
KNVLDIKLGIASTVMIVVSIVYVNAMNLLLAHRILTFRHPETGDATWFGWAMIGVYLVII
GVIVMAVISQVVIFLYFLNYQNWRQATGAMQASSVFATLVAIGGVFLIGLAYVLPRGALS
LHNDDRRRLPASNIESYGMFYFPPKYSQVLQYEADPSAKIDSGKLAARVLNGRDLGSSAA
IIIITSLILTTTAAMRCATCFLGERWSLNVAPIYSNTLFYIGFGLFETIANVIFLVVRID
LRFYIPDWPIKGTGPLTIKPGTMEIMTDPYRQGPPGMGPDEKHFEKAHFEEVQPPMPPMP
TYGASYGPISYAGLSPEVLAAANAMNTTPGAIQQTEEEAERAAEKAANPHTPFSEATKLP
TDSEFVDPIPPMPEKKLKHSPELREATLPQLVNLGSAPGTPNAAAATFGEIPHATPMSMP
TVSQTPMPTLPTITTAHEPSFAQLQRERLDATPSLPEISFPPTPYQIRAVTPAAFPTPII
SPATPQQFPEAHFSRVTTPMERGFTPVTRGFTPKQDLNEPTYGVPYAERVSIPSPVHDYD
PHYSKPYEEPKDEFRNSGGSEEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG