YALI0F19778g

Overview

Description some similarities with uniprot|P39743 Saccharomyces cerevisiae YDR388w RVS167 reduced viability upon starvation protein
Locus type CDS
Locus tag YALI0F19778g

Location

Species Yarrowia lipolytica Positions 2629081..2630917
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1837 (nuc.)
Previous locus YALI0F19756g Next locus YALI0F19800g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19778g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19778gYALI0F19778g_mRNA-001YALI0F19778g_CDS-001

Nucleotide sequence

 

>YALI0F19778g
ATGAGACATTTATTAAAGTTTGCATATACATTATCTAATCACTCATCGCCACCAGAGTCA
CCCGGTACAAAACCAGTGACGCGGACTGCAACTCTCCCCCAACCCCTGCAAATGACATCG
TACCTGCGAGGCACGCGAAAGGCCCTGGAACGGGCGCCCCACCGCCTGTTTGGCAACAAG
TCCGTGGAAGATCGAGTGATTGTGGAATGGGCCAAGGATTTCAAGGTGGCCCAAGATGCG
CTTCATTTCCTGACCCACGAGCTCACAACCTGGACCGAGACATGGAAGAAGCTGCTGGAC
TCGCAGGCGGACTTTGCTACCGTCTTCGCAGAGCTGTACAGACCCATTGTCGAGGACAAA
CACAACTTTAAGGAACCCCAGGTGACGCCAAAGTCCGTGTTGGCGTACGTGACCGACTAC
GAGCATCTGGCTCAGGATCTGGCTGTGGCGCTGCTGCCATTGACCGAGAGCCTGTGCTCA
GTAGCCTGCGACCGCATCAACACGGTCCGGTCTCAATTGGAGTCCATTGAGAAACGCCTA
ACCAAACGAGCCCACAAAAAGATTGACTACGATAAGGCGTCCGAGTCGCTACACAAGGCC
ATCAAGAAGAGCACAAACTCCGAAAAGGATAAGCTGCATATCGACACTCTTCAGGCCCGA
TTCGACGAGGCCACGGAAATCTTCATGGCCATTGATGGCGAGGTAAGAACCCAAGTGCCT
CAATACCTGGCCATGCTCTCAGAGTTCCTGAACCCCTTCACTACCTGGATCTTCTACCAG
CAGATGACCATCTACGAGCTGCTGCAGGAGAAAATCCTCGAATTCAGTGTCACCCAGGGT
CTTACTGAGTGCTCCTCGGTGCACCCCCAGAGCGAATCGTTCCGAGAGATCTCAGAATGC
TGGAGAGACCGGTTCCCTGATCCCCTGAACCGAGCGGAGGAGGGACTCAAGACGATCCGA
GGAGGAGAGACTGTGAAGACAGACTACGACGACTGGGACAGTGAAAAGCACTTCTACACC
GGAGAGCGTCACGCACAGTTCTTCGAAAAAGCCAAGGATGACATTACGGCAACCACCATG
GGCCTTGTGGATAAGGCCCAGAAGCCGTTCCATCACGACAAGCCTGTGCTGTTCTCGTCG
GATCAGGGTTTGTTCCAGGGTGAAGCTGACCCTCTTGGATTGATAGGAGGAGACTCTAGC
TTGACTCCCGTGACGTCCTACGATGGAGGGTCGGGTACCAAACTCACCCCTCAGTTGACG
CCACAGAGCTCGCCCCTCAAACAAACCCATTCCCCTCTCAAGACCCCAGCGTCACCAATA
ACTCGACGGTCTCGAGCGTTTTCTAACCTCTCCAACGTGTCAACGTCCACTAACGCCAAC
TCCGGCCCTACTCCCATCACATGTCGCCTGGAGGAAAGATATCCCAGTGACGTGACTCGT
CGTGCTCGTGCGTGGTCTTCTTCGTCCGCCAGAGCACTATCGCCTCATCACATGACCCTT
GAAGAGGTGCGTAAGAGTTGGGCTCCTGAAGGCGAGGACGTGGAGATGCTCAACGAGGAG
GAGTCGGGGACTCCATCGTTCGGCTCTGTGATTGCATTGTTCCCGTTTTCAGGCCAGCAA
CCTGGAGACGTGGCGTTCGAGAAGGGCGACACTCTCAAGCTGCTGTACAACGCTGAGAAT
GAGGATTGGTGGGTGGGACAGACCAAGGATGGACGCTACGGCTTCTTTCCCCGAAACAGA
GTCGGAATGGTGTAGGTCTCCGCTAGTGTGGATTCGACCTAGATAGTAGATGATGACGAA
GTAGATGCATAATGGATAAGATTGGTAGGAAAAGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19778g_CDS-001

Protein length: 585 aa.
Product: Conserved hypothetical protein

>YALI0F19778g_CDS-001 MRHLLKFAYTLSNHSSPPESPGTKPVTRTATLPQPLQMTSYLRGTRKALERAPHRLFGNK
SVEDRVIVEWAKDFKVAQDALHFLTHELTTWTETWKKLLDSQADFATVFAELYRPIVEDK
HNFKEPQVTPKSVLAYVTDYEHLAQDLAVALLPLTESLCSVACDRINTVRSQLESIEKRL
TKRAHKKIDYDKASESLHKAIKKSTNSEKDKLHIDTLQARFDEATEIFMAIDGEVRTQVP
QYLAMLSEFLNPFTTWIFYQQMTIYELLQEKILEFSVTQGLTECSSVHPQSESFREISEC
WRDRFPDPLNRAEEGLKTIRGGETVKTDYDDWDSEKHFYTGERHAQFFEKAKDDITATTM
GLVDKAQKPFHHDKPVLFSSDQGLFQGEADPLGLIGGDSSLTPVTSYDGGSGTKLTPQLT
PQSSPLKQTHSPLKTPASPITRRSRAFSNLSNVSTSTNANSGPTPITCRLEERYPSDVTR
RARAWSSSSARALSPHHMTLEEVRKSWAPEGEDVEMLNEEESGTPSFGSVIALFPFSGQQ
PGDVAFEKGDTLKLLYNAENEDWWVGQTKDGRYGFFPRNRVGMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG