YALI0F19734g

Overview

Description weakly similar to uniprot|A3LXY3 Scheffersomyces stipitis cation efflux family protein
Locus type CDS
Locus tag YALI0F19734g

Location

Species Yarrowia lipolytica Positions 2624359..2626259
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1901 (nuc.)
Previous locus YALI0F19712g Next locus YALI0F19745r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19734g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19734gYALI0F19734g_mRNA-001YALI0F19734g_CDS-001

Nucleotide sequence

 

>YALI0F19734g
ATGACCAACGAAGAAACGCCGTTGATTGACAAGCGGGAGGCCTCTTTGTCGCGGGAGAAC
AGCTCATCCCGGGGCAGAGGGTACCGCAGCTCTTCTGCTGGCAAGCACTATCCTCGAGGA
CGAGACGAGACCACTGAAGAGGAGAGAGGCTCAGGGAGACGATCGTCCGAGACAATTGAT
CCTCGATACAACAGCACCCGACGACCTTCCAGTGCCAGTGTTCTTGGAATTGAGCGAGGG
GGTCCCCGGGAGCATCTAAGCATCCATGTTGATGAGGAGAGAGAGGGGCGAGACTTTGGA
TCTTCTCCTACTTCCCCTTGCCTTTCTCGAGCTCAGTCTCCTATCAGACGACGGACTCTG
TACTCGCCCATTCCTCTCGCTCCTGGAGCCTTTGGACAGGCACTGCATACTCTCAACTCC
ATGTCTTCTCTGCCTACCCGAGAAGAGCGTCTTTCGCAGCTCAATCAGCTCACGGAACTG
CGTCCTTTCCGGCTGATTGGCTACTCTCGTCCTCTCACCAACTGGGAGGTGTACCGTAGC
GACAGCGAGATGCGGAAGGGCAAGTCTGCCGGAGTACGGCGGTTCTACGATAACCAAGAC
GAGCTCATTGACCGGTTTGAAGCCGTGGACAAGATTCTGGACTCTGGAATCCACCACACG
CTTCTTAGAACCTACGGAACCGATCTGGTGGATGTAGACGAGAACTCCACGCCGGAATTC
AGACAGGGAGTGCCTGCTAACATCCATGAAGATCTTGAATGGGGCACTTCTCGAGTTGAG
TCTCAGACGGACATTATGATCGCCATCTACGTCAATTTCTTCATCAACACAGTTCTCCTG
GCTGGTAAACTGTGCGTTGCATTCCTGACAAACTCGCTGTCCGTTGTTGCTTCCGTCGTA
GACTCCGTTCTGGACTTTATGTCGACCCTCATCATCTGGCTCAGTACCAGACTTGTCGAC
AGAAAGGACTGGGAGAGTCAACAGAGCTATCCCGTTGGTCGATCGCGTCTGGAACCCATC
GGTGTTCTGGTCTTCAGTATTCTCATTGTTCTGTCGTTTTTGCAGGTCGGAAAAGCGTCA
GTAGAACGACTCATCTCAGGAGATCACTCCACCGTCGATGTGGGTATCCCTGCTTTGGCC
GTCATGTCCCTAACCATCATCGTCAAGCTGTTTTGCTGGGTCTGGTGCCGAAGATCGCCT
TCTTCTGCTGTCCAGGCTCTCGCCCAGGACGCCATGACCGATATCGTGTTCAACACTTTT
TCGATCGTGTTCCCCCTGGCCGGCCAGCACCTGGACATTTGGTGGCTGGATCCCATTGGA
GCCATCTTCCTGTGTCTCTACATTATCTATTCCTGGGGAGCTACAGGTCTAGAACACATT
GACAACCTATCTGGCGCGGCAGCTGACCCGGCAGACCGCCAGATGGTGTTGTACATGTGC
ATGCGTTTCGCAGACTCCATCCGAGAAGTTTCTGCGCTCAACGTGTACCACGCCGGAGAC
CGTCACGTGGTCGAGGTCGACATTGTCCTCGACTGCACCTCTCTTAGAGACGGTCACGAC
ATTGGCGAGGCTCTTCAGTACGCCATCGAGACGCTTCCTTTCGTGGAGCGAGCCTTTGTG
CATCTCGACTACCGAAGAGACAACTACGCCGGACATATCCCGAGGTAAGGGGCCATTTCG
TTTTAAAAAACTTAGCCAGTGGTCCAGTGACAATGTGCGCGAAAGCACACGTCCGTGACA
TAAGTCGGTACCGGATCTTCCAGCCGCAACACTCTACCTCCAGTCCAAACGGGCTATATA
ATATGTATCAATTTTTTCCACTCAGTAAACGATCACCGAACTGTACTGATATGGTGTGTG
CATAATAGTTGGTGCGTCAAACAACATGAAAATGTTAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19734g_CDS-001

Protein length: 556 aa.
Product: Conserved hypothetical protein

>YALI0F19734g_CDS-001 MTNEETPLIDKREASLSRENSSSRGRGYRSSSAGKHYPRGRDETTEEERGSGRRSSETID
PRYNSTRRPSSASVLGIERGGPREHLSIHVDEEREGRDFGSSPTSPCLSRAQSPIRRRTL
YSPIPLAPGAFGQALHTLNSMSSLPTREERLSQLNQLTELRPFRLIGYSRPLTNWEVYRS
DSEMRKGKSAGVRRFYDNQDELIDRFEAVDKILDSGIHHTLLRTYGTDLVDVDENSTPEF
RQGVPANIHEDLEWGTSRVESQTDIMIAIYVNFFINTVLLAGKLCVAFLTNSLSVVASVV
DSVLDFMSTLIIWLSTRLVDRKDWESQQSYPVGRSRLEPIGVLVFSILIVLSFLQVGKAS
VERLISGDHSTVDVGIPALAVMSLTIIVKLFCWVWCRRSPSSAVQALAQDAMTDIVFNTF
SIVFPLAGQHLDIWWLDPIGAIFLCLYIIYSWGATGLEHIDNLSGAAADPADRQMVLYMC
MRFADSIREVSALNVYHAGDRHVVEVDIVLDCTSLRDGHDIGEALQYAIETLPFVERAFV
HLDYRRDNYAGHIPR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG