YALI0F19316g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F19316g

Location

Species Yarrowia lipolytica Positions 2575147..2576712
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1566 (nuc.)
Previous locus YALI0F19294r Next locus YALI0F19360g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19316g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19316gYALI0F19316g_mRNA-001YALI0F19316g_CDS-001

Nucleotide sequence

 

>YALI0F19316g
ATGAACTCTCAACGCAGGTGAGTATACTACATTTCGATAATTTCCACTCCAGCTGCCTCG
GGCTCTTCTCCGTCTCCCTGTCACGTTGCAACCTCTTCATCCAGGGTCAGTTAGTCAACT
TGCACGACGCTACGACAGTCACAACAAAACCACACCATGTACTACTCGAACCTCTACCAA
GACCCTCTTTATCAGGTGGCCCAGAAGTCTCCATCTACCGACTCTCGGTCGTCTGATTCT
GCGTCCACGACACCCACGACACCCACAAGCACACATGATTTCGTGTACCCGTCCAACTAC
CAGTATCTCTCGTACAAACATACTAACCCGTCCAGGCGCAACCAAGGCCCGTCAGACGAC
ATTCCGCCGGTGCCTGAAATGCCGCCCATCGAGGCGCTAGACTTGAGCCCCTCAGGAACT
GGAAACACCGCCACCACCGCAACAGCAACTTACCCCAACGTCGCGCTCAGCAAACGACGT
TCGCAGGCACACATCAACAGAGACTCCAATTCTTCAGGATCGGTCTCTTCGCGACGCATG
TACGACCAACGTCATCAGCAACAGCAACAGCAACAGCAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAATACTACCAAGAGTCGCGTCAGGACCTTCGACCA
GTCGAGCCTCTTCACTTTGGAGACACGCAATCTGACTCGTCTCAACTTCCAAACCTGCCC
CGAAACTTCCCCAAGTCGCTAGCAGAACATACAGACCGAAGCGAACGGCGCTGGAAACAA
CCGCCTCCCCAGGTCACAACCTCATATTCACGACTCTCACCACCTTCCCAAGGTCCCTCT
TCTCCCGGAGAACAACAGACTACGTCTCCCACAGGCTTCTCCAGCACTTTGATCAACTCC
ATCAGTAAAAAAACAAAGGGTCACGCAGCTCCCATCTTGCCCATGGGAACAGTCAAGAGC
TCAGTCTTCTGGCGGGAACAGGAGGCACGCGACAAGCTGCGAATGCTATGCGCTCCTGCG
GAAAATGCAGAAAACGCTACAACCTTTGATGAGATTGTTGAATTCGGCTTCCCCGTTGGC
ATTCCAACGTCGCCCAATGATATCGGATTGGGAGCACGACAGATGACTCTACACGTGACT
CTGTCGCCAGCAGCCATGCGTGATCGAGACGAGGTTCTTTATGGCTGGCAGAAGGAGCTG
GCTACCGGAACCAACAACAATTCAAACCCTACCGTGGACGATGTGTCTACATACCAGCAG
TCAAATTACGACGACGACAGATTGCGTGGACAGCAAGCTCTTCTCAGCGGATCCACGGGA
ACAGGAGGAATGAAGCGTGTATTTGGCAAGCTCAAGAAAAAGGCACCTGCAAACAGCAGT
ATTATGATCACCTCAGCCGACGTTCAATAATGAGATCCTCTTCTCCCTGTTCGTCCTAAT
GACATTTGTTTCTTGACACTCACACACGCGTCCGCAAGCCGGACTTGATACCTTTTTTTG
TACCACGTTTTTTAATGCGGCTATTTATATGGATGTATTGGTAATGGAATAATATTAATT
TTTTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19316g_CDS-001

Protein length: 364 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F19316g_CDS-001 MNSQRRRNQGPSDDIPPVPEMPPIEALDLSPSGTGNTATTATATYPNVALSKRRSQAHIN
RDSNSSGSVSSRRMYDQRHQQQQQQQQQQQQQQQQQQQQQQQQYYQESRQDLRPVEPLHF
GDTQSDSSQLPNLPRNFPKSLAEHTDRSERRWKQPPPQVTTSYSRLSPPSQGPSSPGEQQ
TTSPTGFSSTLINSISKKTKGHAAPILPMGTVKSSVFWREQEARDKLRMLCAPAENAENA
TTFDEIVEFGFPVGIPTSPNDIGLGARQMTLHVTLSPAAMRDRDEVLYGWQKELATGTNN
NSNPTVDDVSTYQQSNYDDDRLRGQQALLSGSTGTGGMKRVFGKLKKKAPANSSIMITSA
DVQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG