YALI0F19162g

Overview

Description weakly similar to uniprot|E3JS32 Puccinia graminis hypothetical protein PGTG_01496
Locus type CDS
Locus tag YALI0F19162g

Location

Species Yarrowia lipolytica Positions 2562740..2564227
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1488 (nuc.)
Previous locus YALI0F19140g Next locus YALI0F19184g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19162g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19162gYALI0F19162g_mRNA-001YALI0F19162g_CDS-001

Nucleotide sequence

 

>YALI0F19162g
ATGGTACTGGGATTGGACTACCTCAAAAACAAAGTAGTGGGCAAGGGTGAGTCGTACATT
CTCGGCTTCATCCCTAACATCTTCCGATACATTTCTCTTTTGTGGGGATACTTTCAGGTG
CATGTTCTGACCACTCTTGCCAACCAGAAGAAGTGGCGCATTCTAGTGGTACAGAATGTA
GCACGGGGGAGCGATCCCTCTACAAGTTCATACGAAGAGAAGTTCTTCACTGTATGGAAT
AACTGGATCCTCCTGGGCCTCTACAGGCTGATCAATGGCTCCACCACTCTCTTCAACACG
ACTCAGATCGACAAGGCCGCCACTGCGGTCATCTCAGAGTACTACTACAATTTCTCTCCT
GAAAAGACACGCCCCTTCGCCGAGAGCCTCTACATTCTCAATTGTGAGATCATTCTGGGC
CGACGAGTTGACATGACTGCATACTTCAAGAAGTCTGTGAGCGACGACTCGCAGCTCAAA
GGTGGTTTCATTCCCAACGAAGACTCCAAGAACCAGCTTCTGAACGCTCTGGTGCTCTAT
GAACTGCCTCGATACACAGGAGTGTCGTTCGATGACCGACAGGAAGCTCTGGAGCTGTCT
CTCGCCATTATTGGAGCTCTCAATGACACCAAGATTGACCTTATCAAGCTCTCCGAGACA
CCTGTCACCTGGGCTACTGCTAGCAAGAAGTTGATGGATATCCCTGCTACTGCTCAAAAG
ATCCCGCACCAGGATGTGGTGAAGGGTGCTCCTTCTTCCAAGGGTGAGATCCAGTGGGAG
AACTTTGGTTTCCAAGGCAAAGATCCGTCCACTGACTTTCGAGGTTCTGGAATGTTGGGC
TTGGAGGCTTTTCGACACTTTTACTTGTTTGATCCCGCTGAATCTACCAAGCTGATGACA
CAATCCGGGGCAACAGACCCTGGTGAGACCTGGTACCCTCCTGCCCTCATCAGCATCAAT
GTTGTGTCCCATCTGCGAGACATGCTCGTTGCCGGACAGCTGGACCGGGGCTTCATTCTC
AACATTAATGGCGAGCTCTTGAAGCGAATTGGAACCCTGGCGTTCCACGAGAATGACAAG
AAGAAGCAGGACTACTTTTTCGAGATCAGAGGCGAGCTTGATCGGGAGTTCAAGGAGGTT
TTCTACAGACTACACGAGCATCTTGTCTACAAGTTCCATCTCTTCTGGAAGCATGGTGTG
CAGGAGAAGAAGATTCAGAGCGTTCTGCAGACTGACAACCACCTGAAGATCTTCCTGGAG
AAATACGACGCAAACCTGCGACGGGGAGACTGGAAATAAAACATGAGAGACACACACGTG
CAACACACAAACATTAGTTAATTGATTCATCTGATCTGCAAAAACATGTTGGTGATGGTT
AAGAGTCACATAACAAGCAGGGTCCATGCACTCGCTTTCTTACATAGCACCATAGAATAC
GGTGTTGTCGGCATTATCAAGACAGAATTTAATTTGGTGATGTTATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19162g_CDS-001

Protein length: 433 aa.
Product: Conserved hypothetical protein

>YALI0F19162g_CDS-001 MVLGLDYLKNKVVGKGESYILGFIPNIFRYISLLWGYFQVHVLTTLANQKKWRILVVQNV
ARGSDPSTSSYEEKFFTVWNNWILLGLYRLINGSTTLFNTTQIDKAATAVISEYYYNFSP
EKTRPFAESLYILNCEIILGRRVDMTAYFKKSVSDDSQLKGGFIPNEDSKNQLLNALVLY
ELPRYTGVSFDDRQEALELSLAIIGALNDTKIDLIKLSETPVTWATASKKLMDIPATAQK
IPHQDVVKGAPSSKGEIQWENFGFQGKDPSTDFRGSGMLGLEAFRHFYLFDPAESTKLMT
QSGATDPGETWYPPALISINVVSHLRDMLVAGQLDRGFILNINGELLKRIGTLAFHENDK
KKQDYFFEIRGELDREFKEVFYRLHEHLVYKFHLFWKHGVQEKKIQSVLQTDNHLKIFLE
KYDANLRRGDWK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG