YALI0F19140g

Overview

Description weakly similar to uniprot|K9HTF6 Agaricus bisporus hypothetical protein AGABI2DRAFT_217354
Locus type CDS
Locus tag YALI0F19140g

Location

Species Yarrowia lipolytica Positions 2561349..2562486
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1138 (nuc.)
Previous locus YALI0F19118g Next locus YALI0F19162g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19140g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19140gYALI0F19140g_mRNA-001YALI0F19140g_CDS-001

Nucleotide sequence

 

>YALI0F19140g
ATGTCGACTGACGATTACGTGAAACATAACATCGAGTTCTTTGAGGGCAAAAACTCGGGC
CCTGAAAAGAAATTGACAAGCGAAAACTACCAGAAAATCGCAGACCAGTGCGCACGTTTG
CTGCTGGGGTTCGAGTTTGGAACTGCCCATTCTACCACTCGAGACGACACCTATGACACC
TCAGTGAGCTCGCTTTGGAAGCATGATCCTGCTCCCAAGGTACTTGACTTTGCTGGAGGC
CTTGGACTTGTTGCCCAGCGAATTTCCTCTTACACCAGCGAGGTGGTGGGCGTGGATGTG
TCTCCTAAGATGGTGGAGGGCTTCAACGAGGCTGTTCTGAACCAGGGCATTACCCCCAAG
GAAATGAGAGCTATTGTGGCAGACATTTCGAAACCGGCAGACTTCGAAAAGGTGAAGCAG
GAGGCTCTTGGTGGATTCAACATTGTCTTCTCCTCGCTCTCCTTCCACCATCTTCCTGAT
ATTGATGGTACCCTCGAGAAGCTGTTTGATCTGACCAAGTCCGGTGGTACGATACTGATC
ATTGACTTCATCTCTATTTCTGGCGAAGGCGCAGGGGAAATCTTTCCTGATGCCAAGGGA
CACTCCAATCACTCTCATGGCCATGATCACAGTCATCACCATGGTGATCCTCACGGCCAC
TCTCATGGCGGCGAGCACTATCATGTGGTCGCGCACCACCATGGCTTCTCTGAGGAATCT
ATCACCAAGTCTCTGGAGACTGCAGGCTTCTCAAACGTCTACCTTTCTCCCCACTATGTG
GCTCTCAAACGAACCACTGATGGTATCAGCCTGGACTCAAACGGTCACCATCCCGATCAG
AAGCTGCGACTGAGAATCATCGGTGCTCGAAAGTAGCCGGTGTGAGGTGCGTTTAATCTG
TATATATTTCAACAACTCAACTAACGATTTTAATGGCGTGTTCATGGCAAGGCGGCATAT
TTTTGCTCTGTCTTGATAATACAGCAGCAAACCGAGGCAGCCGGCAGTCATGCATCTACT
GTATGTACTTGTAGGACTTGCTGTTTAGGATACACCTGCTTGTATGTAGCTTGCCATTGA
TGATTTTGTGTGTCTATAGCTTCAACAAAATTATTAATTCAGGCTGCAACACGTTCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19140g_CDS-001

Protein length: 292 aa.
Product: Conserved hypothetical protein

>YALI0F19140g_CDS-001 MSTDDYVKHNIEFFEGKNSGPEKKLTSENYQKIADQCARLLLGFEFGTAHSTTRDDTYDT
SVSSLWKHDPAPKVLDFAGGLGLVAQRISSYTSEVVGVDVSPKMVEGFNEAVLNQGITPK
EMRAIVADISKPADFEKVKQEALGGFNIVFSSLSFHHLPDIDGTLEKLFDLTKSGGTILI
IDFISISGEGAGEIFPDAKGHSNHSHGHDHSHHHGDPHGHSHGGEHYHVVAHHHGFSEES
ITKSLETAGFSNVYLSPHYVALKRTTDGISLDSNGHHPDQKLRLRIIGARK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG