YALI0F19118g

Overview

Description weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
Locus type CDS
Locus tag YALI0F19118g

Location

Species Yarrowia lipolytica Positions 2559216..2561162
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1947 (nuc.)
Previous locus YALI0F19096g Next locus YALI0F19140g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19118g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19118gYALI0F19118g_mRNA-001YALI0F19118g_CDS-001

Nucleotide sequence

 

>YALI0F19118g
ATGAAGTGGATCGGTACATTCAAGAACTGCTTGGTCGGTGGAAGCCAGCAGCAAACCCAC
GATGCTGAAGAACGGGGATCCACATGCGGATCTAACTCTGTCAAAGCAGCTCCCACTGAG
ACTACATTGATAAAGAAGATCTTCAATCCCACCATCGTCCAACAGAAAGACACATGTGTC
GATAATGCTCTAGGTGGATCCCAAGAGATGGAACAGATCACTTCTCTCTGGAACAAGACG
GATCTTTGGATGGCCTGGGCCTCCATGCTACTAGTAGCCGTCGCGGTGGCCCTCGAAGTT
CAGACAGTCTCGGTCTACTCTACATTTGCAACTTCCGACTTTGACCAGATGTCTCTGCTG
TCTGCTCTCAGTGTGGTCAAAGCGGTCATGTACATTGCCACTCGGCCAGTGATGGCCAAG
TTTGCCGATGTACTTGGTAGATTCGAGTCGATTCTCATGTCTGTGGTTCTCTTCACCATT
GGCTTCATTATGTTGGCCGCTTCACCCAACATTGGCACCTACTTTGCTGCCCACATCTTC
TACGTGTTTGGCCAGGTAGGTATCCAGTTCATGGAACAAGTTTTCGCTGCAGACACTTCC
GATCTAAAAAACCGAATGTTTTTCGTCATCCTGCCCAACATCTGCTACCTCTTCGTGCCT
TGGTGCTCGGCTCCCATCACCAACGCTATCATTAAACACTCCACCTGGCACTGGGGCTAC
GGAATGTGGTGCATCATTGTCCCTGTCGTATCCATCCCAGTCTTGACGATTATGTTCAGA
CATAAGATGAAAGCTCGCGCTCTTGGAATGCAGTGCGGCAAGTCTGTCCGCAACATGAAG
GAGACTCTTCTTCAGTTCGATTTAGTGGGCCTCATTTTGTTCACAGGGGGTCTCTGCTTG
CTCTTTTTGGCTGTCACTTTAGTCAAGTCCTCCAAGTCCTGGACCCAACCCCATGTTCTT
CCCATGATCATAATCGGACCCATTCTTCTCCTCCTGTTCCCAATCTGGGAAAAAACGTAC
CCCAAATACCCTTTCCTTCCTTTCTCTGCCATGAAAGATCGAACTCTCATCACTGGATGT
ATCTTTGTGGGCCTCTATTCTCTTGCCTTCTACATCTACTACCCTTACTATTACCCCTGG
CTCCTGGTATGCAAGGGTCTCTCAGTCACTGCTGCTACCAACACCTCTGTGACTTTTACA
GTGGCCTCCACAGCTGCTTCAATCGGTGCTGCAGCTCTCATTCGTTACACCAAACGAATC
AAACCTATTATTGTGGCTGGTGGCTTTGTGTACATCTTGGGACTGGGTCTGACATACCAC
TACCGACAGCCCGACCACTCTCTTGCTCAATTCATTGCTGCCCAGGCCGTGGAAGGAGTT
GGATCCGGCATGCTGCAGTCTCCCACTCTGGTATTGATTCAGTCTGTGGTCAATCACAAC
CAAGTGGTATCTGCTACGGCCATCTTCTACTCTTCGATTTCAGTCGGAACGGTCATTGGA
GATGCCATTTCGGGGTCCATGTATCGACAGTCATATCCGAAGCAACTGACTGAGTACGCT
CCTTTTCTCAGCGAAGCAGACATTCATAAGATGGTCAATGATGTTCGAGCACCTCTCAAA
TACGCGTGGGGTTCTCCTGAACGAGTGGCCGTGATTGAAGCATTCAACCATGTCTACCGA
AAGATGCTCTACGGTCCTCTTGTGGTTGCGGGTGTGATGATTCTCATTTCTTTCACGATG
CCCAATGTTGATCTTGATGAGCTTGAGCAGCGGGTCAAGGGAGTTGTTTTCGGCAAGTCA
GATAAGCCTGCCGATGGTGAAAAGAACCCCGTCAGTAACCAATGTCCTTGTGACATCTTG
CCCACGGACAACTCTTCGCAAGATGGCGACTTCGAGAAATCTGAGTCGGTTGTGTCAAAG
ACCATTCATAACGAGCAAAAGATCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19118g_CDS-001

Protein length: 649 aa.
Product: Conserved hypothetical protein

>YALI0F19118g_CDS-001 MKWIGTFKNCLVGGSQQQTHDAEERGSTCGSNSVKAAPTETTLIKKIFNPTIVQQKDTCV
DNALGGSQEMEQITSLWNKTDLWMAWASMLLVAVAVALEVQTVSVYSTFATSDFDQMSLL
SALSVVKAVMYIATRPVMAKFADVLGRFESILMSVVLFTIGFIMLAASPNIGTYFAAHIF
YVFGQVGIQFMEQVFAADTSDLKNRMFFVILPNICYLFVPWCSAPITNAIIKHSTWHWGY
GMWCIIVPVVSIPVLTIMFRHKMKARALGMQCGKSVRNMKETLLQFDLVGLILFTGGLCL
LFLAVTLVKSSKSWTQPHVLPMIIIGPILLLLFPIWEKTYPKYPFLPFSAMKDRTLITGC
IFVGLYSLAFYIYYPYYYPWLLVCKGLSVTAATNTSVTFTVASTAASIGAAALIRYTKRI
KPIIVAGGFVYILGLGLTYHYRQPDHSLAQFIAAQAVEGVGSGMLQSPTLVLIQSVVNHN
QVVSATAIFYSSISVGTVIGDAISGSMYRQSYPKQLTEYAPFLSEADIHKMVNDVRAPLK
YAWGSPERVAVIEAFNHVYRKMLYGPLVVAGVMILISFTMPNVDLDELEQRVKGVVFGKS
DKPADGEKNPVSNQCPCDILPTDNSSQDGDFEKSESVVSKTIHNEQKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG