YALI0F19030g

Overview

Description similar to uniprot|Q6CH88 Yarrowia lipolytica YALI0A11198g
Locus type CDS
Locus tag YALI0F19030g

Location

Species Yarrowia lipolytica Positions 2541941..2544461
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2521 (nuc.)
Previous locus YALI0F18986r Next locus YALI0F19052g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19030g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19030gYALI0F19030g_mRNA-001YALI0F19030g_CDS-001

Nucleotide sequence

 

>YALI0F19030g
ATGAAGTTCTCTGCCACTCTTCTCGCTGCTGCAGTCAGCGTTGCTGTCGCCGACCCTATC
CTCGGAAAGGGACCCGACCCCAACACTTTCTGGTTCTCCCAGCCCTCTACTCCCGGAGCC
CCCGCTCCTTCCAACCCTCCTGCCGCTCCCGCTCCCAAGCCTAACCCCGGCGGAGTTGAC
CCTAACACTTTCTGGTTCTCGCAGTCCAGCACTCCTACCCCTGCTCCCCCTGCTCCCGCT
CCCAGCACCCAGGCTCCCGCCCCCCCTGCTTCTTCTCCCGCTCCTCCCGCTTCTTCGGCT
GCCCCTGCCCCCCAGCCTGAGGAGACCTGTATCGCCCCCGCCGGCGCTCAGGAGAAGCGA
TCTCTGGCCCTCCTGTCCCAGGTCTTCTGCTCCACCAAGTGCTTCAAGCTCTCTTTCGGT
CTGCAGACCTGCCAGGGTCTCCAGTCCTGCGAGTGTCAGTTCCTTGATGGCTTCGCCTGG
ACCCAGAAGTGTCTGTCTTGTGCTCAGGCTTACCCCCAGTACGGCATGCAGGAGATCGAC
GACGTCATTAAGAAGTGCCACCCCCAGGCCACCTCTTCTGTCGCTCCCCCTCCCGTTGTT
GTCACCACCACTCCCCCCGATGTTACCAGCTCTCTTCCCGAGTGTGAGGTTCCTCCTCCC
ACTTGTACCCCCGAGCCTTCTCACCCCGCTTCTCTTGATAACATGCTTAACAAGCGATTC
AACCTGATCGGCAAGCTCACCTGCAAGAAGACCTGTAACACCGTTGTTGCTGACATCAAC
TCCTGTGGCCAGGATGCCAAGTGCATCTGTGACAAGATCAAGTCCACCCAGTCTGCTGTT
GACCAGTGCACTTCTTGTGTCCAGCAGTACAACATGTGGCCTTACTTCAACGTCGACAAG
CAGCTCCTCCAGTACGTTGAGGCTTGCAAGGCTGTCGCCACCCCCACTGCCACCCCCACT
CCCATCATCCCCGTCTGCCCTACCGAGGGTGCCACCACTGAGCCCGCTCCTTCTTCCACC
CCTGCCTCCTCTACCCCTGCCTCCTCTACCCCTGCCTCCTCTACCCCTGCCTCCTCTGCC
CCCGCTTCTTCCAAGCCCGAGGAGTCTTCTGCCGTCCCCACCTCCGCTCCCGTTGCTCCC
ACCAACGCCACCGAGTCTTCTGTCGCTCCCTCTACCACTGAGGCTGCTACTTCCCCTGTC
CCCACCAACGGAACTGTTTCTTCCTCTTCCGTTGCTTCTTGGACTACCAAGACTCTGACC
TCTACCGTTCCTTGCCACGAGTGCGAGCACGGCGGCAACAAGACTGTCATCGTGACTGTC
ACTGAGCCTTGCTCTACTGAGGTCCCTACTACCTCCGAGGTTCCTACCACCTCCGTTGAG
GCTGTCCCTACCTCCGAGGCTCCCGTCCAGAACACCACCCAGACTGTCACTGAGGAGTGT
GAGACTTGCAAGCACTCTTCTACTGCTGCTCCTTCTCTCACCACCAAGACCACCGTCATT
GAGGGTAAGACTGTCACCATCACTGAGCCCTGCTCCACTGAGGCCCCCACCGAGGCCCCC
GAGGCTACTTCTGCCCCCGTTACCACCAAGGTCACCGTTGTTGAGGGCAAGACTGTCACT
CTCACTGAGGAGTGTGAGGAGTGCAAGCACCACTCTACCGAGGCCCCCAAGCCCAAGCCT
ACCTCCGAGTACCCCGAGGGAGTTTCTCTCACTACCAAGGTCACTGTGATCGAGGGAGTT
ACCAAGACTGTTACCGTTCCTTGCGATACTACCACTGAGGCTCCCGTCCCCGAGACTTCT
GCCCCTGCTCCCAAGCCCGAGTCTTCTGCTCCCCCCGCTCCTGCCCCTGCTCCTGAGTCC
CCCGCCGGCAAGCCCGAGCCTACCCCCGCTCCTGCTCCCTCTTCTGCTCCTGCTCCCGCT
CCCAAGCCCGAGTCTTCTGCTCCTGCTCCCGCTCCCAAGCCCGAGTCTTCTGCTCCTGCT
CCCGCTCCCAAGCCCGAGTCTTCTGCTCCTGCTCCCGCTCCCAAGCCCGAGTCTTCTGCT
CCTGCTCCCGCTCCCAAGCCCGAGTCTTCTGCTCCTGCTCCCGCTCCCAAGCCCGAGACT
TCTGCCCCTGCTCCTGCTCCCAAGCCTGAGGAGTCTGCCCCTGCTCCCGCTCCCAAGCCC
GAGTCTTCTGCTCCTCCCGCTCCTGCTCCTGCTCCTGAGTCTCCCGCCGTCAAGCCCGAG
TCTACCCCCGCCCCCGCCCCTGCCCCCGCTCCTGCTCCTGCTCCTGAGTCTTCTGCTCCT
CCCGCCCCTGCCCCCAAGCCCGAGGCTTCTGCTCCTCCCGCTGGCAAGCCCGAGGTTCCC
CAGGCTCAGCCTTCCACCCCCGAGCAGGCTCCCCAGGCTCCCTCTTCCGGCCCTGCCCAG
GCTAACGGCGCTGCCTCCAACGGTATCTCCGCCGCTATCCTTGCCGCTGCTGGTATCCTT
GCTCTTTTCTAAATTATGAAGTAGAAAGCAGTATACATTTAATATTATTCAATACCCCTT
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19030g_CDS-001

Protein length: 824 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F19030g_CDS-001 MKFSATLLAAAVSVAVADPILGKGPDPNTFWFSQPSTPGAPAPSNPPAAPAPKPNPGGVD
PNTFWFSQSSTPTPAPPAPAPSTQAPAPPASSPAPPASSAAPAPQPEETCIAPAGAQEKR
SLALLSQVFCSTKCFKLSFGLQTCQGLQSCECQFLDGFAWTQKCLSCAQAYPQYGMQEID
DVIKKCHPQATSSVAPPPVVVTTTPPDVTSSLPECEVPPPTCTPEPSHPASLDNMLNKRF
NLIGKLTCKKTCNTVVADINSCGQDAKCICDKIKSTQSAVDQCTSCVQQYNMWPYFNVDK
QLLQYVEACKAVATPTATPTPIIPVCPTEGATTEPAPSSTPASSTPASSTPASSTPASSA
PASSKPEESSAVPTSAPVAPTNATESSVAPSTTEAATSPVPTNGTVSSSSVASWTTKTLT
STVPCHECEHGGNKTVIVTVTEPCSTEVPTTSEVPTTSVEAVPTSEAPVQNTTQTVTEEC
ETCKHSSTAAPSLTTKTTVIEGKTVTITEPCSTEAPTEAPEATSAPVTTKVTVVEGKTVT
LTEECEECKHHSTEAPKPKPTSEYPEGVSLTTKVTVIEGVTKTVTVPCDTTTEAPVPETS
APAPKPESSAPPAPAPAPESPAGKPEPTPAPAPSSAPAPAPKPESSAPAPAPKPESSAPA
PAPKPESSAPAPAPKPESSAPAPAPKPESSAPAPAPKPETSAPAPAPKPEESAPAPAPKP
ESSAPPAPAPAPESPAVKPESTPAPAPAPAPAPAPESSAPPAPAPKPEASAPPAGKPEVP
QAQPSTPEQAPQAPSSGPAQANGAASNGISAAILAAAGILALF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG