YALI0F18766g

Overview

Description highly similar to uniprot|P0CX37 Saccharomyces cerevisiae YPL090C (ohnolog of YBR181C) RPS10B ribosomal protein
Locus type CDS
Locus tag YALI0F18766g

Location

Species Yarrowia lipolytica Positions 2505084..2506002
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 919 (nuc.)
Previous locus YALI0F18744g Next locus YALI0F18788g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18766g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18766gYALI0F18766g_mRNA-001YALI0F18766g_CDS-001

Nucleotide sequence

 

>YALI0F18766g
ATGAAGGTGAGTGACGGTGGATATTGGTGTGACTAAGGCGACACGGGAGAACGACAGAGA
CGGTATTGAGGGGAGAAATTACCATGTCCCGTTTGTCGAATTATGTTGGATCACATTTGG
ATCATATCTCTGACAAATTTCTAACACCAGCTTAACATCGCATACCCCGCTCAGGGCACC
CAGAAGTGCATTGATATTGAGGACGAGCACCGAGTCCGAGGCTTCTACGAGAAGCGAATG
GGCCAGGAGGTTGAGGCTGACTTCCTCGGTGACGAGTTCAAGGGCTACGTGCTCAAGATT
ACCGGTGGTAACGACAAGCAGGGTTTCCCCATGAAGCAGGGAGTCATGCACCCCACCCGA
GTCCGACTTCTGCTGTCCAAGGACTCTTCCTGTTACAGATCTCGACGAGCCGGTGAGCGA
AAGCGAAAGTCCGTCCGAGGATGCATTGTCTCTTCCGACCTGTCTGTTCTGTCTGTCGTT
ATCGTCAAGCAGGGCGATGCCGACATTGAGGGCCTGACCACCGAGACTGTTCCCCGACGA
CTCGGCCCCAAGCGAGCCAACAACATCCGAAAGCTGTTTGCTCTCTCCAAGGAGGATGAT
GTCCGACAGTACGTTATCCGACGTGAGGTGACCACCAAGTCCGGAAAGACCTACACCAAG
GCCCCCAAGATCCAGCGACTCATCACTCCCCGACGACTCGCCCACAAGGCCCAGCTCCGA
GAGAAGAAGGTCAAGGCCATCCAGGCCTCCAAGGATGCTGCCGCTGAGTACGCCCAGCTG
CTCGCCAAGCGAGTTGCCGAGAAGAAGTCTGAGAAGGCCGAGGAGAAGAAGCGACGAGCC
TCTTCTCTCCGAACTCAGTCTGTCCAGGCTTAAACGGTTGTTTATAAAAGAAAAAGATGT
ATTATTTCATGCCCAGAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18766g_CDS-001

Protein length: 243 aa.
Product: Ribosomal 40S subunit protein S6, putative

>YALI0F18766g_CDS-001 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG
FPMKQGVMHPTRVRLLLSKDSSCYRSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGDAD
IEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYVIRREVTTKSGKTYTKAPKIQRLI
TPRRLAHKAQLREKKVKAIQASKDAAAEYAQLLAKRVAEKKSEKAEEKKRRASSLRTQSV
QA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG