YALI0F18546g

Overview

Description some similarities with uniprot|Q07834 Saccharomyces cerevisiae YLL032C Protein of unknown function that may interact with ribosomes
Locus type CDS
Locus tag YALI0F18546g

Location

Species Yarrowia lipolytica Positions 2476529..2479597
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3069 (nuc.)
Previous locus YALI0F18524g Next locus YALI0F18568g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18546g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18546gYALI0F18546g_mRNA-001YALI0F18546g_CDS-001

Nucleotide sequence

 

>YALI0F18546g
ATGGACATCATCGTGGCCATTCCGCTGCGGTACACGTACCTGTACCCGCCCACAGATTAC
ATGTGGCATGTGGGAAACGTGTTTCGACCGCTGGATCAGGAAACAGAGAGGTTTCGAACC
CGACTGGCAGCCAAACCAGACACTAAAGAGGTGCTGGACAACCTGGTGAGCCTGCGAAAG
GTCGTTTCCGAGATCTCCGACGTGAAGGCCAACCTGGAGGAGCGTCGGCTGGTTGAAAAC
ACCGTCACAGTGTCTCTGATGGGCGCTCGACAAGCGGTCCAGACCGAACGAACACGGATT
CTGAGAGCATACACGGCTGTGGCTCGAGGCCATGTGGCGCTGGAGGATCGAGTGGTTTCT
CAGCGAGGAGATGACCTCAAGGAAGGTCTCACGGAAATCGCCACCTACTGCAATGTGTCG
ATATATGTCACCAACAACGTCGACAAGGTGACCTATGGTCTGGGGTACTCTGGAGGCTCT
GTGTCCTCTTCGGATGCTCAGAAACCCTTCCACGTGCTCATCTACGGCGACCAGGAGCTC
GTTCAGTACGCCCAGTTGCGAGTGGAGATTCTGATCCACAAACTCATGGGCTCCTTCATC
GACGCCATCGAAGTGCCCCTCTCAATGCAGCCTCTGATTGCCGGATGCCAGCTGCTCAAC
GTCAAAAACATTGAGGCCCAGAGCCATTGCAAAATCCTCTTCCCCAATTGGCTACCCGAG
CTGTTCCACGTGGACGAAGAGATGAACCTCAACTACGATACGGTCTTTGTTGTGGGCCCT
ACACAGCATCATACACTTCTTGCCAAGACGCTCATTGCAGAGATCAAAAACAAGACGCAA
ACAATTTACAAGGACTGTTTGGGTTCCTACGCCAAAATCGACCTCATGTGTCTCAAGTAC
CAACAGCGACTCAAGGAGGTGATGCAGAAGCTGGGAGCTTTCATCCAGGTGCCCTTTTTG
GGTGCCTCTAGATCCGTCATTCGAGTGACGGGAATTTCAGATACCCATGTTGAACAAGCC
ATTGCCGAAGTAATGCTTATGGCTTCTGGTTCATACCATGCCGGCTTTTGGGCCCATACC
GGCCAGGAAGACCCTGCCACAAACACTTATGTTGGAGTCGATGTCAAGTACACAGAGGAC
TACCTCTCTTTCATCGATCTGGTTGCTGGAACCTCTGGAGCTACTGTCTCATGCTCGGGC
TCTTCGTTTGAAGTGTCTGGATTCAAGGCCGATGTCAAGCGGGCTGTTTCTCTGCTGGCC
AAGGCCCCTTTCTGGCCCAACGCCCAATGCCAGCTGCGGTTCCGACTAGAACTACCTCTT
TCCGAGTTTGAATTTGTCACCGGCAAGAAGAATGGAAAGATTAACCGGATCATGGATTCG
TCGAAATGTTTTATCAAGCTGTCTCCCTTCCACGAATACAACTTTTTCCTGGATATTGTG
GGCGACGACAGTGGCAAGGTGCTGACCGGCGTGCAACTGCTGGAAGAGGAGTTCCCCTCA
GAAACGCAGTTTTACATTCCCGAAACATACCACAAGCAAGTCATCGGAAGCGGTGGCCAC
CTCATCCAGACGCTCATGCGAAAATACAATGTGTTCATCAAGTTCACCAACGGCTACGAC
CGTGCCCCCAACGGATACTCGCACCACCGGTTCGACAATGTGCTGGTGCGATGTCCGTCT
AAAAACTCGGCCAACATTGCTCCCACCAAGAGCGACATTCTGGAAACGGCCACCAAACGA
GCCGGCGATCACGGCAACACATTCATCAAGGTGTCGCGTTCCCATCGTCGCATTCTTATG
ATGGAGAACGATCTCTTTATCAACATTGCCGAAGGCCAGTGGAACACGTGTGTCATCTTC
CCGTCCATTGAGCCCAGCGACATTTGCGATAACGACGAGGTCGAGATTCGAGGTCTTCTG
GGCTCCTCCGCGGAAGCTGCTCACGTGATCAAGAACTCTCTCCCTAACGACTACGAGTTT
AAGGTCGCGTACTCGAACCGTTTTGCAGAGGTCTGTTCTGAAGACAACCCCGAGTTCTTC
TCCAAAATTGTGGTTCCTCTGCGAGTTGCCCTCAAAATCCATCTCCAGGTCTACCCCGAA
CCTCGAGTGATGAGTGGACAGAATCTGCTGGGCCAGACCGACTACGATTCTCCCCGATAC
CAGCGAATCGTTCTGTCGTTCACCTTGGAACATGCCCCTGGTCTGGAGGAGGCCATTCTG
GCTCTGACCACCTATCTGCGTGAGAAGGAGCTCGACATTATCGATCGAGGAGATTTAGTT
CAAGACGTGATTCGACAGGGTTCCGTGCCTCTCAATACGGGTTCATCCGAGCGAATTGTC
GAGGAGGAGCACAACGAACAGGAGCCCCGAGCTGCCAAGTTCTTTGACGTTGTTCCTGGA
GACTCTCGCGACAGAGACTCGCGTCCCAGCTCTCGTGATCACAGCGGTCCCTTTGGTGGC
AGAGGTGGACCCGGCGGAGGAGACGGAGGATACCCCAATCTCCCATACAGAGACCCTTAC
TACCAGTACCCTGACCACCGCGACTACGACCAATTTGACGGTCCTCCCGGCCAGCAGGAG
TACTACGAAAAATACCGAAACCCCCGGTTCCGAAGCCCAGTTCGAGGCGGTCCTCCTGGT
GGAGGCATGAACCGAGACTCGCGAGATCAGCATGAATACGACCAATACGCCCAGCAGCAG
CAGCAGCAGTACTACGGTGGTGGCGGACGAGGAGGAGGAAGAGGAGGTCCTGGACAGGGT
GGCCACAGTGGGCCCCCTGGCGGCCCTTACAATCGAGAACAGCGGTTCTTTGGAGGTAAT
AACTCGGCACCTCCGCCTGGTCCTCCCGGTCCGCCTGGACCCCCTGGACCCCCTGGACCT
CCTGGTTCCAATCCTGGCTCCGAGCAGTCTGGCGATTTCCGAGGACGAGGTTACAACGAT
GACCAGCGTGACCGGAAGCGGTTCCAGCCTGCCAGCTACTATTGATAATAATGATACCTA
TATTTGATGATTGTATGTAAAATGATTTCCACTGACCCGTAGTAGTTACAATGTGATGAT
ATCAACTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18546g_CDS-001

Protein length: 995 aa.
Product: Conserved hypothetical protein

>YALI0F18546g_CDS-001 MDIIVAIPLRYTYLYPPTDYMWHVGNVFRPLDQETERFRTRLAAKPDTKEVLDNLVSLRK
VVSEISDVKANLEERRLVENTVTVSLMGARQAVQTERTRILRAYTAVARGHVALEDRVVS
QRGDDLKEGLTEIATYCNVSIYVTNNVDKVTYGLGYSGGSVSSSDAQKPFHVLIYGDQEL
VQYAQLRVEILIHKLMGSFIDAIEVPLSMQPLIAGCQLLNVKNIEAQSHCKILFPNWLPE
LFHVDEEMNLNYDTVFVVGPTQHHTLLAKTLIAEIKNKTQTIYKDCLGSYAKIDLMCLKY
QQRLKEVMQKLGAFIQVPFLGASRSVIRVTGISDTHVEQAIAEVMLMASGSYHAGFWAHT
GQEDPATNTYVGVDVKYTEDYLSFIDLVAGTSGATVSCSGSSFEVSGFKADVKRAVSLLA
KAPFWPNAQCQLRFRLELPLSEFEFVTGKKNGKINRIMDSSKCFIKLSPFHEYNFFLDIV
GDDSGKVLTGVQLLEEEFPSETQFYIPETYHKQVIGSGGHLIQTLMRKYNVFIKFTNGYD
RAPNGYSHHRFDNVLVRCPSKNSANIAPTKSDILETATKRAGDHGNTFIKVSRSHRRILM
MENDLFINIAEGQWNTCVIFPSIEPSDICDNDEVEIRGLLGSSAEAAHVIKNSLPNDYEF
KVAYSNRFAEVCSEDNPEFFSKIVVPLRVALKIHLQVYPEPRVMSGQNLLGQTDYDSPRY
QRIVLSFTLEHAPGLEEAILALTTYLREKELDIIDRGDLVQDVIRQGSVPLNTGSSERIV
EEEHNEQEPRAAKFFDVVPGDSRDRDSRPSSRDHSGPFGGRGGPGGGDGGYPNLPYRDPY
YQYPDHRDYDQFDGPPGQQEYYEKYRNPRFRSPVRGGPPGGGMNRDSRDQHEYDQYAQQQ
QQQYYGGGGRGGGRGGPGQGGHSGPPGGPYNREQRFFGGNNSAPPPGPPGPPGPPGPPGP
PGSNPGSEQSGDFRGRGYNDDQRDRKRFQPASYY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG