YALI0F17886g

Overview

Description some similarities with uniprot|P43574 Saccharomyces cerevisiae YFL021w GAT1 transcription factor for nitrogen regulation
Locus type CDS
Locus tag YALI0F17886g

Location

Species Yarrowia lipolytica Positions 2383960..2386198
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2239 (nuc.)
Previous locus YALI0F17864g Next locus YALI0F17897g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17886g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17886gYALI0F17886g_mRNA-001YALI0F17886g_CDS-001

Nucleotide sequence

 

>YALI0F17886g
ATGTTTGGAATCTCTGGCTACTCCGAGTCGGATGGCTTCAACGACTTTTTCCCCGAGGAC
AACGACATCTTCGACAAGTTCATCGACGTGGACGGCAACGCCAACGACTCGCAGAACCAC
GCAATCTCCCACAACACCCATGTCATCTCCGCCACCAACAACAGCGCAAACAACAACACC
GCGGCCATCAACGCCAACATAGCCGAGTCCTTCCAGCAGCCCGTTGACCTCATGGGCATG
CTACTGTCCGGCCAAAAGAATGTCAACCAACAGACCCGCATGGACAACTCGCACTGGCGA
CGGCAGAACGTCCCCCAGCAGCAACAACAGCAGCAGAAGCCCCCCGCCCATTTCAGCCCC
TCGGTGGCACCTACCGTGGCCACCTCCAGTGTGAATGTGGAGTTTGGGCTGCTCAGCCCC
GATGATGGACTGGATTCGCAGTTTGGCTCGGTCAACACCAACAGCTCGTCCTTCCAGCCA
GTCTTCTCGAAGTCCAACTCCTTCTCCAACGAGGCCACACCGTCGGGACTGGATATGACC
CCCCAGTCCATCGTTGACTCGCCCGAGGAGCCCAGCAATAACACCGGCAAGGGAGGCATG
TTCCAGATTGGTTCGTATGACACCCCCAGCGGCATGGCCCAGAGCTTTGGAGCCTACAAC
AACGCCAGCGGCATGATGGGCGGAGCTAACAATAACGGAAATGCCAACAACTCGACGACA
AACCTGGCCGACAACCTATTCACCAACAACCTGCACAACTCACAACCGTTCGGCTCGTAC
AACCCCAGCGCATCGTCGTCCTCGCACCTACATAGCCAGCTCAGCAGTATACCCCAGGGA
CAGCAGCACAACAGCACCGGTGGAGGAACTGGAGGAGGAATGGGAGGAGGAATGGGAGGT
ATGGCAGCGTCTGCCCCCGCAGACAACTCGTTCCATTTCGCTCTGGACCCATTGGCTGTC
GAGGGTATCGACTTCTACCAGGAAAACTCTATGCCTTCTCACCAGAGCCAAACGCATCTA
TCTGCACAGCAGAGATCTCGCTCCAACTCCATTCGAGGCGGTCCTATCCGACGAAACCGG
TCGTCACACTTTTCCTCTCCCTACTCTGCATCTCCCAACGTCCAGTTCCAGACTTTTGCG
TCCTCTGGCCACCACACTCCAAATGCCAGTGTGCCATCATCGGGAGCTTCCACCCCCGTG
GAAGAGCCTCTGTTCTTCGACCCCTTCCGAAGCAACAACAACAACGCTCTGACCAACCCT
CACTCGCTGGCTAACTCGCTCAGCAGCACAGCCATTGCCCCTCCTCGAGAAGCGCGGTTT
TCGGTTTCTTCCGCCTCGGCGATGGCCTCGGAGTCGCCCTCTCCCGAGCAGAGCACAGCT
GCCACTTCATACCATTCGGGCGTAAATCTCTCGTCGCCACACAAGCAGCTGCTGCCTAAG
GTGGCATCCTGCCGGTCAATGACCACCTCCATGGGCTCCAACCTGCGACCAATCAAGCGG
CAAAACTCGTCGTCTACTAACCTCCGAAAGGTTTCCACCTCGGCCTCCTCCCAGACGCTG
TCTGCCATGTCTACATCGTGTCCCTCCAACAAGGAAGCGCTGCAGTGCTCCAACTGCAAC
ACAACCACCACTCCTTTATGGCGACGGTCTCCTGAGGGAGAGTCGCTTTGCAACGCTTGT
GGTCTGTTCCTCAAGCTGCACGGTGTTGTCCGGCCTCTTTCTCTCAAGACAGACGTGATC
AAGAAGCGAAACCGAGCCTCTGGAACCGGCACCACCTCGGGCAACTCGTCGTTATCTTCT
TCGCTGACCAACGACAAGTCTAACCCCATTGCTGTGCCTCGAATGACTCCCATTGCGTCT
TCTGCGTCCTACGGCAAGAAGATTCTGCCTGCTGTGGCTCCCATGTCGGCCACCAAGTCC
GTTCCTCTGGTGCCTATTGCGCCTCGACCAAAGCCCTCGCAGTCGCAGGCCCCTGTTCCC
ATTGCGCCTCTCTCTAAGGAGGCCTACATTCGCACCAAGAAGTCCAATCTGACGCGGTTG
GTCAAGCAGGAGAAAGATGAATATGACTGGTTGAAGTTGAACCCCTCTACTTAGGCGCAC
TACAAAACGACACACAGCACACAACTAAAAGAACAAAAAAACAAACACACGGGAAGGGGA
AGGTTGCATGGTGAAAACAGCTTTATAGCGATCATAACTTAATTTATTGTATATTAATGG
AATACTAGTGGATAGAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17886g_CDS-001

Protein length: 698 aa.
Product: Conserved hypothetical protein

>YALI0F17886g_CDS-001 MFGISGYSESDGFNDFFPEDNDIFDKFIDVDGNANDSQNHAISHNTHVISATNNSANNNT
AAINANIAESFQQPVDLMGMLLSGQKNVNQQTRMDNSHWRRQNVPQQQQQQQKPPAHFSP
SVAPTVATSSVNVEFGLLSPDDGLDSQFGSVNTNSSSFQPVFSKSNSFSNEATPSGLDMT
PQSIVDSPEEPSNNTGKGGMFQIGSYDTPSGMAQSFGAYNNASGMMGGANNNGNANNSTT
NLADNLFTNNLHNSQPFGSYNPSASSSSHLHSQLSSIPQGQQHNSTGGGTGGGMGGGMGG
MAASAPADNSFHFALDPLAVEGIDFYQENSMPSHQSQTHLSAQQRSRSNSIRGGPIRRNR
SSHFSSPYSASPNVQFQTFASSGHHTPNASVPSSGASTPVEEPLFFDPFRSNNNNALTNP
HSLANSLSSTAIAPPREARFSVSSASAMASESPSPEQSTAATSYHSGVNLSSPHKQLLPK
VASCRSMTTSMGSNLRPIKRQNSSSTNLRKVSTSASSQTLSAMSTSCPSNKEALQCSNCN
TTTTPLWRRSPEGESLCNACGLFLKLHGVVRPLSLKTDVIKKRNRASGTGTTSGNSSLSS
SLTNDKSNPIAVPRMTPIASSASYGKKILPAVAPMSATKSVPLVPIAPRPKPSQSQAPVP
IAPLSKEAYIRTKKSNLTRLVKQEKDEYDWLKLNPST*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG