YALI0F17644g

Overview

Description similar to uniprot|P20049 Saccharomyces cerevisiae YBR166c TYR1 prephenate dehydrogenase (NADP )
Locus type CDS
Locus tag YALI0F17644g

Location

Species Yarrowia lipolytica Positions 2348300..2349671
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1372 (nuc.)
Previous locus YALI0F17622g Next locus YALI0F17666g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17644g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17644gYALI0F17644g_mRNA-001YALI0F17644g_CDS-001

Nucleotide sequence

 

>YALI0F17644g
ATGTCTATTGAGGAATGGAAGAAAACCAAGCTAGTGGGTGTGATTGGCATGGGCGACATG
GGCCGTCTGTTTGCTAACCACTGGAACTCTCAGGGCTGGAAAGTGCTGGCCTGTGATCAG
GAATCCCACTATGAGAAGCTCAAGGAGGAATTTGCCGATTCGGAGATTGAAATCGTCCAG
AATGGCCACTATGTGTCTCGAAAGTGCGATTACATTCTCTACTGCGTCGAGGCCGAGAAT
ATCGGCAAGATTGTCAGCATCTACGGTCCCTCTACAAAGGTCGGTTCCATTGTAGGTGGT
CAAACGTCCTGTAAGGCTCCCGAGATGGCTGCGTTCGAGGCACATCTGCCCTCTGACGTG
GATATCATCTCGTGCCACTCACTACACGGCCCCAAAGTCAACCCCGAGGGCATGCCTCTG
GTGATTATCCGACACAGAAACACCGAGGAGTGGAAGTTCGAGTTTGTGCAGTCACTGCTG
GAGTCACTCAAGTCCAAGATTGTCTACCTGTCGGCAGAGCAACACGACAAAATCACTGCC
GACACACAGGCTGTGACTCACGCCGCATTTCTGACCATGGGCAAGGCCTGGCAGGCGAAC
GGACAGTACCCCTGGCAGATAAGCCGTTGGATCGGAGGTCTGGAAAACGCAAAGATGAAC
ATCTCGCTGCGAATCTACTCCAATAAATGGCACGTCTATGCCGGTCTGGCCATCTCAAAC
CCCGCTGCCAAGGTTCAGATCCAGCAGTACGCATCCAGTGCCGGCGATCTGTACAAACTC
ATGATCACAGGCAAGGAGCAGGAGTTGCTTGACCGCCTTACGGCTGCCCGAGACTTTGTG
TTTGGAGGCCTCAAGAAGGAACACTCGCTGCTGCTGTCCGATGAGATTCTCGAAAAGTTT
TCGCTCGGAACCAAACCCCTGGGAGAAACACAAAAGCCGAACTCGCATCTGTCACTGCTG
TCCATTGTCGACTCGTGGCACAAACTCAAGATCAACCCCTACGACCACGTCATCTGCTCG
ACACCTCTGTTCCGAATCTGGCTGGGTGTCACTGAATACGTCTTTTGCACTCCAGGACTG
CTCGAACAGTGCATCAAACACTCCATTACTAACCAGGACTTCCGACCCGACGATCTGGAG
TTTGTGGTGGCTGCTCGAACGTGGTCTAAGGTCGTTTCTTACGGCTCCTACAAACTGTAC
GAGCAGGAGTTCAACGACACCCAAAAATACTTTGCTCACATGTTCCCTGAAGCCACTCGA
ATTGGCAACGAGATGATCAACACCATTCTGTCAACCACTTAAGACACACTTGCAGGTCTA
AAAGTTCCTAGAAAACAATAGTTTCAATAATAGAGTGACTATGATGATGATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17644g_CDS-001

Protein length: 434 aa.
Product: Prephenate dehydrogenase involved in tyrosine biosynthesis, putative

>YALI0F17644g_CDS-001 MSIEEWKKTKLVGVIGMGDMGRLFANHWNSQGWKVLACDQESHYEKLKEEFADSEIEIVQ
NGHYVSRKCDYILYCVEAENIGKIVSIYGPSTKVGSIVGGQTSCKAPEMAAFEAHLPSDV
DIISCHSLHGPKVNPEGMPLVIIRHRNTEEWKFEFVQSLLESLKSKIVYLSAEQHDKITA
DTQAVTHAAFLTMGKAWQANGQYPWQISRWIGGLENAKMNISLRIYSNKWHVYAGLAISN
PAAKVQIQQYASSAGDLYKLMITGKEQELLDRLTAARDFVFGGLKKEHSLLLSDEILEKF
SLGTKPLGETQKPNSHLSLLSIVDSWHKLKINPYDHVICSTPLFRIWLGVTEYVFCTPGL
LEQCIKHSITNQDFRPDDLEFVVAARTWSKVVSYGSYKLYEQEFNDTQKYFAHMFPEATR
IGNEMINTILSTT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG