YALI0F17402g

Overview

Description weakly similar to uniprot|P46985 Saccharomyces cerevisiae YJL183w MNN11 related to MNN10P, and in a complex containing other MNN gene
Locus type CDS
Locus tag YALI0F17402g

Location

Species Yarrowia lipolytica Positions 2319966..2321283
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1318 (nuc.)
Previous locus YALI0F17380g Next locus YALI0F17424g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17402g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17402gYALI0F17402g_mRNA-001YALI0F17402g_CDS-001

Nucleotide sequence

 

>YALI0F17402g
ATGCACCAAGCGCTCCCCCGTCCCGGCGGCTCCGAAAACTCGTTTGTGCCGCGCAACGGC
CGGTCCGGCGGCCTGCTGGGCCAGATCAGAGCCACCGCCCAGCGGATAGCTGGACCGTCA
TTCAACCACCGAGGATCGTCCAACCTCAGAGCCCTGGTGGTCGGCCTGGCCATCTTGCTG
TCAATTTACACGTTTGTGTCGATGCTCACGACCCCGGCCGGATATACGTACAAGACTGGC
ATCCCCGTGCTCGGCGGAGGCCCCGACTCCATCAAGGTGGCCTACTCCAAACAGCCCTAC
ATCTACCCCACCATCGCCAACGAGGACCTCAAGCTCAAGGACGGCGCCGATAAAGACCGG
CAGACGGTGACCCAGTACACACAGGTCATCTACCGAGACGGCGGCAAGTCCAAGCCTGTG
ACCCAGGCCAACATTGTCAACGGCCATGCTCCATTCACCAAGTCTACTCCTGGCAAGCCC
CGAACTGTCATTGTCATGAGTCTGGACGGCACCGATGCTGCGCGAGCCGACTCAGAGCTG
TCGCTGACGATTCTGCAGAACCGACTCAACTATGCCAAGAAACATGGCTTCGGGCTGTAC
GCTCGGTTCTATCAGGACTTCCTCAACCCTCTCAGCGGCCACGGAATCACGCCCGAAAAC
TACGAAAACTGGGCCAAGTTTGAAATCATCCGAGCAGCAATGCAGGCCTTCCCCGACGCG
GACCGAATCTGGTGGCTGGACTCAAACGCCCTCATTGCCAACGACAAGTTCAATGTGGAG
ACTGATCTGTGCGACCCCGTCAAGCTGGAGAAGATCATGCTGCGAGACGTACCCGTGATC
CCTCCCAACGGCATCATCCACTCGTATAAGCGGGTGCCTGCCAAGGACATTCAGCTGCTG
CTTACCCAGGACGATGCAGGCCTCACCTCCGCCTCCATGATCATCTCCAACGACCAGTAC
GGTCAGGCCATCACCGACTACTGGCGAGACCCTCTGCAGTACAAGTACGAGGACTTCCGG
AAACAGCAGCCGGGCAACCCTGAAAACGCCGCCCTTACACACATGGCCCAGTGGCATCCC
ACAGTGCTGTCCAAGACAGCCATCGTCCCCGCGCGAATCCTGGCTGCCCGTGCCTTTGAC
GGCGAGGTTCTCAAGGACGTGCAGTACTCCCCCGGCGACTTTGTGCGCCTGGTGCCCTGT
CACTCGGCTTACCAGTGCCCCACCCAGTGGCTGGAGGCCGTGCATGAGTCCCAGTCCCAG
GCTGCTTCGGCTTAGTCTGAAAATAATTAGCATACGGTATAATAGAGTCACCACAGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17402g_CDS-001

Protein length: 425 aa.
Product: Conserved hypothetical protein

>YALI0F17402g_CDS-001 MHQALPRPGGSENSFVPRNGRSGGLLGQIRATAQRIAGPSFNHRGSSNLRALVVGLAILL
SIYTFVSMLTTPAGYTYKTGIPVLGGGPDSIKVAYSKQPYIYPTIANEDLKLKDGADKDR
QTVTQYTQVIYRDGGKSKPVTQANIVNGHAPFTKSTPGKPRTVIVMSLDGTDAARADSEL
SLTILQNRLNYAKKHGFGLYARFYQDFLNPLSGHGITPENYENWAKFEIIRAAMQAFPDA
DRIWWLDSNALIANDKFNVETDLCDPVKLEKIMLRDVPVIPPNGIIHSYKRVPAKDIQLL
LTQDDAGLTSASMIISNDQYGQAITDYWRDPLQYKYEDFRKQQPGNPENAALTHMAQWHP
TVLSKTAIVPARILAARAFDGEVLKDVQYSPGDFVRLVPCHSAYQCPTQWLEAVHESQSQ
AASA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG