YALI0F17314g - POR1

Overview

Description uniprot|Q6C1D2 Yarrowia lipolytica YALI0F17314g POR1 Mitochondrial outer membrane porin
Locus type CDS
Gene name POR1
Locus tag YALI0F17314g

Location

Species Yarrowia lipolytica Positions 2311743..2313225
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1483 (nuc.)
Previous locus YALI0F17292g Next locus YALI0F17336g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17314g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17314gYALI0F17314g_mRNA-001YALI0F17314g_CDS-001

Nucleotide sequence

 

>YALI0F17314g
AAACACACATACACAAACAGTGAGTATAGTCACCGTGGCGACACAGGCACAGCGCCATTG
AGGCGCCGAACGCCCTCTCCTCCATTGAACACACGCACATCCACAGTGGCACTCTCGACT
CAATTGCACGTGGCTTGATTCACCTCAACGCAAATTGACACGCAACCGAGAGGTACCGAG
TAACAACCGAGGTGGTGGTTTTGCGATCAATCGGGCTGCAAACACAGGTGGCGACATTGT
CAGCCTGTGATGTGAGACCCGACAATGGGGCCATTGAGGGTGCCCATCACGGGTCTCGGT
AACCAGCCCATCGCATTCATGATGTGTCTTGGGGGGGGGAGGTATCACAGGGTGTGATTG
TGTTTTGCACCAACAAACGCATCAACACTATGACACATCGGCATTCAATGGTCGTCTCCC
GTCACAATTGAGTCTATGGCGTCCTTCAACTGCCACAATCACCGTCTGGAGGTGACGATT
GTTTTTTTCTCAGTCGCTGTGCTGCCGCGCGTCTTGATGACACCCGAAAAGCACGTGCTG
AAGCATCATAACACGCAACACGTACTAACCCAGTGGCTCCTCTCGCTTTCTCTGACATCG
CCAAGGCTTCCAACGACCTCCTCAACAAGGACTACTACCACCTTGCTCGAGCCTCCCTCG
AGATCAAGACCAAGGCCCCCAACGGTGTTGCCTTTGTCGCCAAGGGTAAGTCTTCCCAGA
AGGACGGCTCCATTGCCGGTAACCTCGAGGCCAAGTACGCCGACAAGGCCAACGGTGTCA
CTGTCACCCAGGGATGGACCACCGCCAACGTCCTCGACTCCAAGATTGAGATCGATGAGG
CTCTTGCCCAGGGTCTTAAGGGTGAGCTCGCCACCTCTTTTGTCCCCTCTTCCGGTGCTA
AGAACGCCAAGCTCTCTCTCTTCTTCAAGCAGCCCTCTTTCCAGGCTCGAGCTTTCTTCG
ATCTCCTGAAGGGCCCCACCGTCACCTCCGACGCCACTCTTGGCCACGACGGCTTCATTG
CCGGTGCCGAGGTCGGATACGACGTCTCTGACGCCAAGGTCACCAAGTACTCTGCTGCTG
TTGGTTACACCGCCCCCGTCTACTCCACCTCCATCCTGGCCACCAACTCCCTCTCTGTTT
TCTCCGCCGCCTACTTCCACCGGGTTAACCCCGCCACTGAGGTCGGTGCCAAGGCCACCT
GGGACTCCAAGGCTGCTGCCGCCCCCGTCGGTCTCGAGATCGGTGCCAAGCACACTCTTG
ATGCCAACTCTTTCGCCAAGGCCAAGATCAACAACCAGGGTATTGCCGCTCTTGCTTACT
CTGTTGGCCTCAAGCCCGGTGTCCGAGTCGGTGTCGGTGCTTCCATCGACACCCAGCGAC
TCGAGCAGTCCGCCCACAACCTCGGTGTTTCTTTCACCTTTGAGGGTTAATTAGAATACT
TTAATGAGTTCTGTATATGTAATCAGTGTGTCTGACTGACGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17314g_CDS-001

Protein length: 286 aa.
Product: Mitochondrial outer membrane porin
Gene: POR1

>YALI0F17314g_CDS-001 MAPLAFSDIAKASNDLLNKDYYHLARASLEIKTKAPNGVAFVAKGKSSQKDGSIAGNLEA
KYADKANGVTVTQGWTTANVLDSKIEIDEALAQGLKGELATSFVPSSGAKNAKLSLFFKQ
PSFQARAFFDLLKGPTVTSDATLGHDGFIAGAEVGYDVSDAKVTKYSAAVGYTAPVYSTS
ILATNSLSVFSAAYFHRVNPATEVGAKATWDSKAAAAPVGLEIGAKHTLDANSFAKAKIN
NQGIAALAYSVGLKPGVRVGVGASIDTQRLEQSAHNLGVSFTFEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG