YALI0F17160g

Overview

Description similar to uniprot|Q6CB47 Yarrowia lipolytica YALI0C21978g
Locus type CDS
Locus tag YALI0F17160g

Location

Species Yarrowia lipolytica Positions 2297024..2298319
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1296 (nuc.)
Previous locus YALI0F17138g Next locus YALI0F17182g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17160g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17160gYALI0F17160g_mRNA-001YALI0F17160g_CDS-001

Nucleotide sequence

 

>YALI0F17160g
ATGCTACCATCGGAGATACTCGACCACATTTGCTGCTACTTAGATCTGGAGGCTCTCGTT
TCCCTTACTCAAACCAGTCGAGAGCTGCTGGAATTGATTTTTGAAACAACTTACCGTGAC
GTGCTTCTGAGATATTGCCCCTTCTATGATCTCGACTACAGCCAATGGGACAGCTGGAAG
GCTAGTGCCCTTCACTTTTCAAAGGTGGACACACGGCCTTTCGAGTTGAGTCTGAAAAAT
CCAATTCATATCAACACACCTCTTCCAGACGATTTCCAATGTTTCTGCCGCGGAGCAGAT
CTGAAAAGCGAAATTGTCTACGAAGATAGCGGTGTCTTCATCGAGAACAAGTTTGTGAAT
CTCAGCCAATCGCACAGGAAAGTCCCGCCTTCCCCTATACTAATGTACATTGACAGCGCT
CCCTTTGGCTTGGTTCACGAGATCAATTATGGCGAGGAGTCTATGAAGGTGGTAGGCGAC
TTCCATCGATCTATTTGCACTTCGCAGATAATGGCTGCTGTTTCAACCTATGGAGACCAG
CTCGGTCTTCTCATGAAGGATCTTACAGAAAAGATGGAGGATCCCGAAGAAGCTCCCTTG
TACTTTGCAAGACTACATGGTAGAGGGCCATTCAGATTGCAAGCTGTGGGGAAAAGGGTG
ATCCTGGTCGTCACGGGACACAAGGGAGAGCTATTCTCGTCTATATTCAGCGCGCCTGGC
GGATTCACGAATCTTGTGTACACGAAACCGCTTAGAAAACTTCCTGCTGGGATGCTCTTC
TACGACGGCCATGTTTACGACGTGTTCATGTCTCTCTCGAAGAAGCCTGTTGTTCAGAGC
ACCAGATCCAACTCGTCTACTCCTGAAGAGTGGAAACTAAACAGATACCACAAGGTGGAA
CAGGACGAACGACACACACAATATGCCTTGATCTACAACCAGCATGGAGTGGTTTCTGCG
CTTGTCGATCTGAAGGAGCACAAGATCCAAAACTTGATGGATACTCCAAATGCCCCGCAA
AGCTTTGGAACATGGTCGATACCGACACAAGCTTTTGGCACAGAGCGCCACCTGATCTTT
ATTGGCATCTCCAAAGGTGCTGTGCGCATTCATAAGTACTCGGAGACATATTTGGCAGAT
AGGTACAGGGGCCAGAATCACAGAAGCATGCCGATCGGTCTGGATGTATTTCATCCTGCT
GAGGAGGACTCCACCGATGTTCTTACCTATTCAAAGTTGAATTCCTTCGTCGACCGGTTT
GCGGGTTTGAACATTCCTTCTTGGCCCGGGGAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17160g_CDS-001

Protein length: 432 aa.
Product: Hypothetical protein of a 19-member gene family, conserved in the Yarrowia clade

>YALI0F17160g_CDS-001 MLPSEILDHICCYLDLEALVSLTQTSRELLELIFETTYRDVLLRYCPFYDLDYSQWDSWK
ASALHFSKVDTRPFELSLKNPIHINTPLPDDFQCFCRGADLKSEIVYEDSGVFIENKFVN
LSQSHRKVPPSPILMYIDSAPFGLVHEINYGEESMKVVGDFHRSICTSQIMAAVSTYGDQ
LGLLMKDLTEKMEDPEEAPLYFARLHGRGPFRLQAVGKRVILVVTGHKGELFSSIFSAPG
GFTNLVYTKPLRKLPAGMLFYDGHVYDVFMSLSKKPVVQSTRSNSSTPEEWKLNRYHKVE
QDERHTQYALIYNQHGVVSALVDLKEHKIQNLMDTPNAPQSFGTWSIPTQAFGTERHLIF
IGISKGAVRIHKYSETYLADRYRGQNHRSMPIGLDVFHPAEEDSTDVLTYSKLNSFVDRF
AGLNIPSWPGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG