YALI0F17138g

Overview

Description highly similar to uniprot|P32469 Saccharomyces cerevisiae YLR172c DPH5 diphthamide methyltransferase
Locus type CDS
Locus tag YALI0F17138g

Location

Species Yarrowia lipolytica Positions 2295408..2296346
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 939 (nuc.)
Previous locus YALI0F17116g Next locus YALI0F17160g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17138g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17138gYALI0F17138g_mRNA-001YALI0F17138g_CDS-001

Nucleotide sequence

 

>YALI0F17138g
ATGCTTCATCTGATTGGCCTGGGTCTGTCCCACGAAACCGACATCACTGTCCGAGGTCTG
GAGACCATCAAAAAGTGCAAGCGAGTCTACCTCGAGGCGTACACTTCGATTCTCATGGCC
GCCGAGAAGGAGACCCTGGAGAAGTTCTACGGCAAGGAGCTCATTCTGGCCGACCGAGAG
ATGGTCGAGCAGGCATCCGACGACATTCTGGCCGGCGCCCAGGAGGACGATATTGCATTT
CTGGTGGTGGGAGACCCCTTTGGAGCCACCACCCATACCGACTTGGTGATTCGAGCCCGA
GAGCTGGGAATCAAATACCAGACTATCCACAACGCCTCGGTCATGAATGCTGTTGGAGCC
TGCGGTCTGCAGCTGTACAACTTTGGCCAGACCGTGTCTCTCGTTTTCTTCACCGATTCA
TGGAAGCCCGATTCTTTCTATGACAAGATCCACGAGAACCGAAAGATTGGTCTGCACACC
CTGGTTCTTCTTGACATCAAGGTCAAGGAGCAGAGCATTGAAAACATTATGCGAGGCCGA
AACGTCTTTGAGCCTCCCCGATACATGTCTATTGAGCAGGCTGCTTCCCAGCTGCTGGAG
ATTGAGGAATCTCGAGATGAGAAGGTGTACTGTTCCGACACCCCAGCTATTGCTGTCTCT
CGACTAGGATCTCCTCGACAATGCATCAAGGCCGGTTCTCTGGGAGAGCTTGCTGAGTAC
GAGTCTGGCGAGCCTCTGCACTCTCTGATTGTGCTTGGAAACAACGTGCACGACCTGGAG
ATCGACTTCCTGGTCGAGTTTGCTGATGATCCCGAGGCTTTCAAGGCTCTCATCACCAAG
GATGCCGAGAACTTCAAGAAGGAGGTCAAGATTATGTCTTACTCCGACGACGACGACGAG
TAAACCAATGTAAAATTAATAAATTATCTTCAACAGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17138g_CDS-001

Protein length: 301 aa.
Product: Diphthamide methyltransferase, putative

>YALI0F17138g_CDS-001 MLHLIGLGLSHETDITVRGLETIKKCKRVYLEAYTSILMAAEKETLEKFYGKELILADRE
MVEQASDDILAGAQEDDIAFLVVGDPFGATTHTDLVIRARELGIKYQTIHNASVMNAVGA
CGLQLYNFGQTVSLVFFTDSWKPDSFYDKIHENRKIGLHTLVLLDIKVKEQSIENIMRGR
NVFEPPRYMSIEQAASQLLEIEESRDEKVYCSDTPAIAVSRLGSPRQCIKAGSLGELAEY
ESGEPLHSLIVLGNNVHDLEIDFLVEFADDPEAFKALITKDAENFKKEVKIMSYSDDDDE
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG