YALI0F16874g

Overview

Description weakly similar to uniprot|Q7SI58 Neurospora crassa NCU00593.1 hypothetical protein
Locus type CDS
Locus tag YALI0F16874g

Location

Species Yarrowia lipolytica Positions 2258032..2259920
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1889 (nuc.)
Previous locus YALI0F16852g Next locus YALI0F16880r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16874g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16874gYALI0F16874g_mRNA-001YALI0F16874g_CDS-001

Nucleotide sequence

 

>YALI0F16874g
ATGTCCGACGACGATGAGTTTATGCTGAGCGCGGGAGACGAGGATTACGACTTTGAGTAC
GAAGATGAGGAGGAGGAAATGGAGGACGACGACAATGAGGCCATGGACTGCGAAAACAAG
TACTACAACGCCAAGGCGGTCAAGGAGGACGAGCCCGAGGAGGCGATTGAGCAGTTCCAA
GAGATCATCAACGACCCTGCTGCTGGCGAATGGGCGTTCAAGTCCATCAAGCAGGTTATC
AAGTGTCTGACAAGCTCGGATGCCAAATCAGCTTCTGAACGAGAAAAAAAGTGGACCACA
ACGTTTGAATACTACGGCAAGATGCTGGATCTCATCACAAGCAAAACGACGTCAATTACA
CGCAACTATGCCGAGAAATCGCTCAATTCTATGGTTGCAAACATCACCAAGAGCGCTGAG
AGTGAGGGATCCGAGTCCTCCGCCAGACAGCTGGAGAAGGTACACACCATGGCCATTGAG
CGGCTCGATGCAAACGGCTCCGATGGATTGTGGCTTAAGACAAAGCTCAAGCTTGCTAAG
CTTTACATCGACGTGGAGGATCTTACCCGTGCCAAAACGGAAATTTGGGAACTTCGAGAG
AAACTGGATCAGCCAGATACCGCCCAAGATGCATCCGACAACTACATGTTGGAGCTGCTT
TCGTTGCAGATCCAGTATTACACCCTTGTTGGAAACACCCGAGAACTAGGCGTCATCTAC
CAACAGACGCTCAACATCAAATCGGCGTGTTTGCCCCACCCCAGAATTCTGGGAGTCATT
CGAGAATGTGGCGGCAAAATGTACATGCGGGAGAAGCGGTGGGACAAGGCATGCGAGGAG
TTTTTCCAGAGTTTCAAAAACTATGATGAGGCCGGATCTCCTGCCAAAATCCAGATTCTC
AAGTATCTGGTGGTTGCATCCATCCTGACCAACTCAGACATTAACGTGTTTGACTCACAG
GAACTACAGCCCTACAGAAGTGATGGCCGCATCTCCCAGATGATGGCTCTGCATGACGGT
TTCTACCAGTCGGATATCAGCGATTTCTACAAAAAGATCTTCCTGCAAAAGACAGACCAG
GATCTGCTTAAAGACAAGTTCTTGAAACAGTACTTTGACCAGATTGTCGATACTGTCCAG
CGAAAGTACGTGGCTCACATCATCAAGCCATTCTGTGCACTGGACATTTCATTCTTGGCT
AGGAAAACTTCCATCGGCGAGGAGGAGTGTCGAAAGCTCTTGGTGAACCTGATTGTGGAG
AGCAACGAGGGTGGAAACGAGAGTCTCAGCGATGCAAGATTCAACAAACTAACCGGACAT
GTGGTTCTTGATCCTGCCGTGCCTCGCCTTGAGGTACCCACTGTCTCTCAGGCTCAGGAT
CTCATCACATGTGAGGCTTCCTCTACCACTGGCCAGTTGACACAGATTCTGTACGGAGGA
GGAGCTGGAGGAATGATCGAGTCCTCTTCTGCTTCTGTTACCGAGGGTCATCGAGTCGGT
GGACCCCACGACATGCCTCTGTATGCTGGTGCTGGGCACTCTATGCTAGAGAAGGAGGAG
ACCAACAAGGGCGACATGGATATTCCACTGCTCTATCCCGTGAAACCCGCCAAGACCTTC
AGAAACATGTCTGCTCTGGAACAGGTCTGGAACCCCGTTGGTCCCATCAAATCTAGACAG
ATGGCTACCTTTGGCCAGGCTGATTTGGATGAAGACGATCTTGATAAGCCTGACATGCCC
TATTCTCGAGATGAGGTGCTCAAGATCTGGACTGACCGGGTTGTCAGAGTCGTTGATGAG
GTTACTAATCTGTAGCCTACTGTATTTAAGAAATTACGTGGGGTACTTACTCCCTTGTCT
GTAGCACACATTTATTCCTGTAACGATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16874g_CDS-001

Protein length: 605 aa.
Product: Conserved hypothetical protein

>YALI0F16874g_CDS-001 MSDDDEFMLSAGDEDYDFEYEDEEEEMEDDDNEAMDCENKYYNAKAVKEDEPEEAIEQFQ
EIINDPAAGEWAFKSIKQVIKCLTSSDAKSASEREKKWTTTFEYYGKMLDLITSKTTSIT
RNYAEKSLNSMVANITKSAESEGSESSARQLEKVHTMAIERLDANGSDGLWLKTKLKLAK
LYIDVEDLTRAKTEIWELREKLDQPDTAQDASDNYMLELLSLQIQYYTLVGNTRELGVIY
QQTLNIKSACLPHPRILGVIRECGGKMYMREKRWDKACEEFFQSFKNYDEAGSPAKIQIL
KYLVVASILTNSDINVFDSQELQPYRSDGRISQMMALHDGFYQSDISDFYKKIFLQKTDQ
DLLKDKFLKQYFDQIVDTVQRKYVAHIIKPFCALDISFLARKTSIGEEECRKLLVNLIVE
SNEGGNESLSDARFNKLTGHVVLDPAVPRLEVPTVSQAQDLITCEASSTTGQLTQILYGG
GAGGMIESSSASVTEGHRVGGPHDMPLYAGAGHSMLEKEETNKGDMDIPLLYPVKPAKTF
RNMSALEQVWNPVGPIKSRQMATFGQADLDEDDLDKPDMPYSRDEVLKIWTDRVVRVVDE
VTNL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG