YALI0F16852g

Overview

Description weakly similar to uniprot|A8N642 Coprinopsis cinerea hypothetical protein CC1G_01962
Locus type CDS
Locus tag YALI0F16852g

Location

Species Yarrowia lipolytica Positions 2250987..2253615
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2629 (nuc.)
Previous locus YALI0F16819g Next locus YALI0F16874g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16852g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16852gYALI0F16852g_mRNA-001YALI0F16852g_CDS-001

Nucleotide sequence

 

>YALI0F16852g
ATGAAGCAAACGGCAACGTTCGACTACAAGTTCCCGATGGACTCGGGGTTTGGCCCCCAG
AGCCACCACGACATGGACTCGCTCAAGTACGACACCTCGTCCTACGAAGAGCTGTTTGGA
GACCTGCACGAGGTGACCCCCCAGCCCAACGACCCGTCGCCTGGCACAAAGATGCAGTCC
ATCGAGGACTTTCAGGACCTAGACGTGGATCTGCTGGGACTCGTGCAAGGCAACCACCCC
GGCGGAAGTAGTCACAACAGCAGTAGCGGAGTGGCGTACTCAAACCCCACCCCTGCCAAC
GCCTCCGTCAACTCGTCCAACACAAACATCATGTACCCGTCGACACTGCCGTCACCACAG
CTGGGTACGCCCATGTCGCAAATGAGCCTGACGTCGCAGTCGATATCGTCGAGCGAGAGC
CTACATCACACGCCACCCATGAGCATGACGGCGTTGTCGTCGCATCAGCAGTCGCCGTTC
CAACATCAGCAACTGCAACAGCAGGTCACCCAGCAGCTCCAGCACCAGCAGCACCCGCCA
CAACAGCAACTTCAGCATCCTCAACAACAGCCCGTGCCAGGACAGGGCCCACCACAACAG
CAGCCCTCGATGCAGCAACAACCACAGCAGCAGATGGCACCCCAGCAGCAGCCCGCTGCC
GCACAGGCCCGCCGACAGCCCTGGAACGTGAACATGAACATGGTGTCGGCGCCCACCCCA
TGGGGCGCCTGGGGTCTCGGTGGCTCCGCAGCAGCAGCCGCCGCAGCCGCAGCGCTGTCG
CAGCACAACGGCGTGAGAGTGTCGCACATTCCCGTGTCCAACAACCCTGCGCCACGGAAG
AAGCTCAGTGAGCACCAGCTGCGAGTGCTGGAAAAGGTGTTCAACGAGACGCCCAAGCCG
TGTCTCAAGACACGCACGGAGCTGGAGCGGGACCTTGATCTGCCGAAAAAGAACATCCAG
ATCTGGTTCCAGAATCGCCGGGCCAAGGAGAAGCAGAACATCAAAAAGCGGGAGGGCGAG
CTGGCCAACGCCGCCGCCAACAGCAGTGCGAGCAACAGTGCCAACAACCCGTCGTCTGCA
GTACGACAACCACACATGGCTGCTGCTGCTGCCGCCGCCGCCATCAACAGCGACGGCCCC
CAGCCGGACCAAAACATTAACAATCCGCCCATGAAACCCGTTATGCATATCCCCAACGCC
AATGGCAAACAGGTGCCCACCACCACCCGACAACGGCCCGGTCTTTCTCTCCAGCGCACA
TTCTCTACCACTTCTCAATCTTCTATTAACAACACACACACACCGACCACCCCGGTCATG
GGAGCTCCTCCAAAGAACCCCACGACCCCCGTGGGCCTCGGAGGCAGCACCAAGCATCCT
TCCTCCACATCGCTGCCAGCGCTGGCATCGACAACCAATTCTGATACGCCCAAACGGCAC
CGGTCCAACTCGTCGGCGTCGTTTGACCGACGGTCCAGCACCAGCGCAACGGCCTCTAAC
CAGTCTGCCCTTGTCGGTATGGGCATCTCCATGCCTGCCGGGGGCCACGGCCACTCGCGG
GCGTCATCCACGTCGGTTCTGGGGCCTCCTCTCGAGCGCAAGACGCCTGCCGAGACGCTA
GCGGCCGCTTCCAAAATGCGCCGAAGCAACTCGTTTATGGGCAACAACATGTCTCTGTCG
CGACGAGGCTCGGAGACTGCGTCGGCCCCCGGCCACGCGCGCAAGAACTCGATGCCCATG
AACCATGTGACGGGCCAGGTGGGCTCAGTGACGTCGCTGACGTCGATCATGACGCCCTCG
CTGTCGCACACACCCTCTGGTTCAGGCCAGGTGACCCCAAACTTGATGACTCCACACACA
CCTCAATTCTCGCTGGACGACGGAGAGGTGACACCATTGAATTCGCCCTCTGCATTTACC
GGCCATATGATGACACCGGGCCCTGGACCTGCCACCCCAATGTCGTCGCAATTCCGAGAT
CGCTCCTTCAGCCAGTCGTCTCTCTACGGCCCTATTGCCGAGGATCATGCTCTAGAGACT
ACAAGCACTAATGGACAGAGTGGACAGCATATGAACAACAACAGCATCAACAACAATGGA
TCGCACTCAAATAACCAGCCCATGCAGTTTGGCAATCCTGTGGAGTTTGATGTGGGCGGA
GGCAACGGAAACGGAGGACAGAGCAACGGTGGTGCCGGCAACAGCATGAGCTTCGGAGTG
AATAGCATCGCAGGTGCCTCTCGGGACTCGTCCGTCTACACTACCAACTCCAACGGGTTC
TCACAGAGCCAGGGAAGCGGTAGTTTCACCAGTCTCAGCACGTCGGTGGACAGCATGTCT
GCAGTTTCCATGGTGATGCCCGACTCCACGCCCATGTTTACTCCGACCATGGATGACGCC
ACCATTGCTGGAGGCGACTCCGACGGCAAGCGCATCAGCGTTGTCAAGGAGGAGGATGAT
CCATATTTCCAGTTTGTTCTTTCTTCCATGTTCCCGCAGGACCAGGCTCACGACAATGAC
GAGTTCTACAACACCATGATGGGCATTAGCTAGCTAGAGTCCAGCTTCCCGGAAGTATAT
ACTAATTCATTCCTTGAATATTTATGAAAAGCAACATGTGTATTTCTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16852g_CDS-001

Protein length: 851 aa.
Product: Conserved hypothetical protein

>YALI0F16852g_CDS-001 MKQTATFDYKFPMDSGFGPQSHHDMDSLKYDTSSYEELFGDLHEVTPQPNDPSPGTKMQS
IEDFQDLDVDLLGLVQGNHPGGSSHNSSSGVAYSNPTPANASVNSSNTNIMYPSTLPSPQ
LGTPMSQMSLTSQSISSSESLHHTPPMSMTALSSHQQSPFQHQQLQQQVTQQLQHQQHPP
QQQLQHPQQQPVPGQGPPQQQPSMQQQPQQQMAPQQQPAAAQARRQPWNVNMNMVSAPTP
WGAWGLGGSAAAAAAAAALSQHNGVRVSHIPVSNNPAPRKKLSEHQLRVLEKVFNETPKP
CLKTRTELERDLDLPKKNIQIWFQNRRAKEKQNIKKREGELANAAANSSASNSANNPSSA
VRQPHMAAAAAAAAINSDGPQPDQNINNPPMKPVMHIPNANGKQVPTTTRQRPGLSLQRT
FSTTSQSSINNTHTPTTPVMGAPPKNPTTPVGLGGSTKHPSSTSLPALASTTNSDTPKRH
RSNSSASFDRRSSTSATASNQSALVGMGISMPAGGHGHSRASSTSVLGPPLERKTPAETL
AAASKMRRSNSFMGNNMSLSRRGSETASAPGHARKNSMPMNHVTGQVGSVTSLTSIMTPS
LSHTPSGSGQVTPNLMTPHTPQFSLDDGEVTPLNSPSAFTGHMMTPGPGPATPMSSQFRD
RSFSQSSLYGPIAEDHALETTSTNGQSGQHMNNNSINNNGSHSNNQPMQFGNPVEFDVGG
GNGNGGQSNGGAGNSMSFGVNSIAGASRDSSVYTTNSNGFSQSQGSGSFTSLSTSVDSMS
AVSMVMPDSTPMFTPTMDDATIAGGDSDGKRISVVKEEDDPYFQFVLSSMFPQDQAHDND
EFYNTMMGIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG