YALI0F15785g

Overview

Description similar to uniprot|P41896 Saccharomyces cerevisiae YGR005c TFG2 TFIIF subunit (transcription initiation factor), 54 kD
Locus type CDS
Locus tag YALI0F15785g

Location

Species Yarrowia lipolytica Positions 2129712..2130903
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1192 (nuc.)
Previous locus YALI0F15763g Next locus YALI0F15791r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15785g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15785gYALI0F15785g_mRNA-001YALI0F15785g_CDS-001

Nucleotide sequence

 

>YALI0F15785g
ATGCAGAACCTCAGCACTTTGGCGGTTTCGCTGATCGAGATAGATACATTTCCATCATCG
TTTCCTCACGACATTCGCACAGACAAGATGAACGTGAAATCTGAGGTCAAGCCCGAAGAG
GAAGATGTTAAGATTCCTCCTCCTCCTGTTGATGCCGACGATGGATCTTTCGACCTGGAT
ACTGCGGGACTCGAAAACCGGGTATGGTTGGTGCGACTGCCCAAGTTTTTGGTGGACAAG
TGGAGCCATCTGGATGAACACACTAACAAGCGACTCGGCCAGGTGCTGATCAAGGAAAAC
ACAGCTCCCGGCGAGAAACAAAAGGTGTCTTTGCGCCTAAGTGATACGCCCGAAAACAGT
GAGATTCCACATGAGTATGAGTTGGATATCGTCAAGGAGGTGGTCAACAACACGTTTGTG
TTCACGGAGAAGGAGCAGAAGAAGGAAAAGGAAAAAGAAAAGGAGGAGGCCGGCAGTAGT
GGAGCCGGCTCGTCGTCGTCGGCAGCGTCATCGTCAGCAGGAAAGGTCTCAAAGCCATCA
GCATTTCCATTTGCACGAACAATCCCCAAGAAAACGGCGCTGGCCGGCCGAGTAATCCAC
GAATGCACAGTTGTGCCGTCACTCAAGGACGCAAATTACAAAAAGGTCATTCAGAAGCGA
AAGGAGCGACTGCAACAGCCTCCTGCTGCCCGAGTCACTCTGCTCAACGACCTCCCCGGC
GTGGTGGCTTCTTCCAATGCCCCCAACCTGCGTGGCACTGGCTCTCAGTCGCACTTCATG
AAGGCCCAGAAGAAGGATATCAAGCTGGACGGAAAGGCCGTTCGGATCGAGCGATCTGCG
CTTCTGGATATCCTCTTCAAGCTGTTCGAAGAGTACCCCTACTGGTCGCTCAAGGGTCTT
AAGGAACGAACCAAGCAGCCTGAAGTGTACCTTCGAGAGGTACTCGATAGCATGGCTGTT
CTCAACAAGTCTGGTCCTTATGCCATGAAATACTCCCTGCAACAGGAGTACAAGCAGCTG
TCCAATTCTGCAGGTGCCCAGGAGGAAGACGATGGTGCAGACGATGATGACGATGATGTT
GAGATGGAGACTGTGTTGTAGATTTGACAAGTGGTTTGCACATGGGTTAGGTGAATAAAT
ATAAATATCATTGACTATATAAATGAGTGAATAAATAGGTCAGTTCTTGGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15785g_CDS-001

Protein length: 367 aa.
Product: TFIIF (Transcription Factor II) middle subunit, putative

>YALI0F15785g_CDS-001 MQNLSTLAVSLIEIDTFPSSFPHDIRTDKMNVKSEVKPEEEDVKIPPPPVDADDGSFDLD
TAGLENRVWLVRLPKFLVDKWSHLDEHTNKRLGQVLIKENTAPGEKQKVSLRLSDTPENS
EIPHEYELDIVKEVVNNTFVFTEKEQKKEKEKEKEEAGSSGAGSSSSAASSSAGKVSKPS
AFPFARTIPKKTALAGRVIHECTVVPSLKDANYKKVIQKRKERLQQPPAARVTLLNDLPG
VVASSNAPNLRGTGSQSHFMKAQKKDIKLDGKAVRIERSALLDILFKLFEEYPYWSLKGL
KERTKQPEVYLREVLDSMAVLNKSGPYAMKYSLQQEYKQLSNSAGAQEEDDGADDDDDDV
EMETVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG